RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TUBA4BQ9H853 241 aa2.54□□□□□ -2
CCDC50-203ENST00000460064 BAIAP2Q9UQB8 552 aa2.54□□□□□ -2
CCDC50-203ENST00000460064 COL18A1P39060 1754 aa2.54□□□□□ -2
CCDC50-203ENST00000460064 SYNJ1O43426 1573 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 TMEM2Q9UHN6 1383 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 IFITM5A6NNB3 132 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 ZNF670-ZNF695F2Z2N8 137 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 C3orf84H3BNL1 204 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 J3QRE1 110 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 KRTAP5-8O75690 187 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 APODP05090 189 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 CD7P09564 240 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST1H1BP16401 226 aaKnown RBP2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST1H2BOP23527 126 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 CASP1P29466 404 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST1H2BBP33778 126 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 TMBIM6P55061 237 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 FOXA3P55318 350 aaPredicted RBP2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST1H2BDP58876 126 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST1H2BCP62807 126 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 CDK6Q00534 326 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 MSMO1Q15800 293 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST2H2BEQ16778 126 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 LGALS9BQ3B8N2 356 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.53□□□□□ -2
CCDC50-203ENST00000460064 LGALS9CQ6DKI2 356 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 SDIM1Q6ZPB5 146 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 OR4S1Q8NGB4 309 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 OR4K13Q8NH42 304 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST1H2BHQ93079 126 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST1H2BNQ99877 126 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 HIST1H2BMQ99879 126 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 TMEM133Q9H2Q1 129 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 CKLFQ9UBR5 152 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 RALGAPA2Q2PPJ7 1873 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 SHANK3Q9BYB0 1731 aa2.53□□□□□ -2
CCDC50-203ENST00000460064 ARHGEF11O15085 1522 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 LCTP09848 1927 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 NUP210Q8TEM1 1887 aaPredicted RBP2.52□□□□□ -2.01
CCDC50-203ENST00000460064 IGHV1-58A0A0C4DH39 117 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 TRBV7-6A0A0J9YX20 115 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 FAM236AA0A1B0GUQ0 79 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 FAM236BA0A1B0GV22 79 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 C1orf196B1AJZ1 125 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 NAPSAO96009 420 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 AKAIN1P0CW23 69 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 CRHBPP24387 322 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 SDC2P34741 201 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 RPL22P35268 128 aaKnown RBP2.52□□□□□ -2.01
CCDC50-203ENST00000460064 GNG4P50150 75 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 NDUFA6P56556 154 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 DIAPH2-AS1Q14236 149 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 AADACL3Q5VUY0 350 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 SSX8Q7RTT4 187 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 LINC00305Q7Z4B0 112 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 IFT20Q8IY31 132 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 TEX29Q8N6K0 151 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 DAND5Q8N907 189 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 OR5A2Q8NGI9 324 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 OR5H6Q8NGV6 325 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 BRK1Q8WUW1 75 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 OR4C12Q96R67 309 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 MRPL57Q9BQC6 102 aaKnown RBP2.52□□□□□ -2.01
CCDC50-203ENST00000460064 DERL1Q9BUN8 251 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 ZNF407Q9C0G0 2248 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 GRIN2AQ12879 1464 aa2.52□□□□□ -2.01
CCDC50-203ENST00000460064 MYH11P35749 1972 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 ZNF727A8MUV8 499 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 CCDC179H3BU77 68 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 TMEM256-PLSCR3K7ERE1 68 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 NCR2O95944 276 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 PRM2P04554 102 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 CXCL1P09341 107 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 FABP2P12104 132 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 CRYBB3P26998 211 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 RPL30P62888 115 aaKnown RBP2.51□□□□□ -2.01
CCDC50-203ENST00000460064 ZNF322Q6U7Q0 402 aaPredicted RBP2.51□□□□□ -2.01
CCDC50-203ENST00000460064 TRAPPC6BQ86SZ2 158 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 C9orf62Q8N4C0 152 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 PPTC7Q8NI37 304 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 C20orf166-AS1Q96NR2 134 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 C1QTNF6Q9BXI9 259 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 IL36BQ9NZH7 164 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 FUT9Q9Y231 359 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 KLK5Q9Y337 293 aaPredicted RBP2.51□□□□□ -2.01
CCDC50-203ENST00000460064 SOX21Q9Y651 276 aaPredicted RBP2.51□□□□□ -2.01
CCDC50-203ENST00000460064 HSPE1-MOB4S4R3N1 261 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 LTBP2Q14767 1821 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 TRAPPC8Q9Y2L5 1435 aa2.51□□□□□ -2.01
CCDC50-203ENST00000460064 OTOFQ9HC10 1997 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 ADGBQ8N7X0 1667 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 PLXND1Q9Y4D7 1925 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 IGKV1-9A0A0C4DH69 117 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 IRGMA1A4Y4 181 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 C17orf98A8MV24 154 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 H3BMG7 143 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 SNAPC5O75971 98 aa2.5□□□□□ -2.01
CCDC50-203ENST00000460064 CST7O76096 145 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms