RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 RPL8P62917 257 aaKnown RBP6.85□□□□□ -1.31
VPS50-208ENST00000458707 ERHP84090 104 aaKnown RBP6.85□□□□□ -1.31
VPS50-208ENST00000458707 C3orf36Q3SXR2 165 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 Q56UQ5 140 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 CT83Q5H943 113 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 ATP1A1-AS1Q5TC04 95 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 C10orf113Q5VZT2 155 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 RNASEKQ6P5S7 137 aaKnown RBP6.85□□□□□ -1.31
VPS50-208ENST00000458707 ZNF841Q6ZN19 808 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 SPATA12Q7Z6I5 190 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 GAFA1Q96PS6 74 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 TMEM70Q9BUB7 260 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 MLST8Q9BVC4 326 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 PRSS22Q9GZN4 317 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 SOX21Q9Y651 276 aaPredicted RBP6.85□□□□□ -1.31
VPS50-208ENST00000458707 A4D1N5 150 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 COX7A2P2O60397 106 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 AZU1P20160 251 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 CA7P43166 264 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 GPR6P46095 362 aaPredicted RBP6.85□□□□□ -1.31
VPS50-208ENST00000458707 LPAL2Q16609 132 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 TMEM177Q53S58 311 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 CCDC144NLQ6NUI1 221 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 DUX4L9Q6RFH8 374 aaPredicted RBP6.85□□□□□ -1.31
VPS50-208ENST00000458707 ZNF788Q6ZQV5 615 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 NEGR1Q7Z3B1 354 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 OR4A5Q8NH83 315 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 OR2T6Q8NHC8 308 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
VPS50-208ENST00000458707 SARAFQ96BY9 339 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 MRAP2Q96G30 205 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 RAB1BQ9H0U4 201 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 ST20Q9HBF5 79 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 RNF7Q9UBF6 113 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 PROCRQ9UNN8 238 aa6.85□□□□□ -1.31
VPS50-208ENST00000458707 DSPP15924 2871 aaKnown RBP6.84□□□□□ -1.31
VPS50-208ENST00000458707 CGB1A6NKQ9 187 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 CD59P13987 128 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 HBBP68871 147 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 FAM201AQ5SY85 155 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 ASPHD1Q5U4P2 390 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 KIR3DL3Q8N743 410 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 OR5AN1Q8NGI8 311 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 TMEM167AQ8TBQ9 72 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 RAX2Q96IS3 184 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 FNDC4Q9H6D8 234 aaPredicted RBP6.84□□□□□ -1.31
VPS50-208ENST00000458707 ZNF492Q9P255 531 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 EPDR1Q9UM22 224 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 PLXNB1O43157 2135 aa6.84□□□□□ -1.31
VPS50-208ENST00000458707 PLCE1Q9P212 2302 aa6.84□□□□□ -1.32
VPS50-208ENST00000458707 A0A1B0GW15 77 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 E7EUB6 86 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 SPRY3O43610 288 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 APOA2P02652 100 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 WT1-ASQ06250 92 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 IGFL2Q6UWQ7 119 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 Q6ZVH6 145 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 SSX8Q7RTT4 187 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 OR1N2Q8NGR9 330 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 GLMPQ8WWB7 406 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 HARBI1Q96MB7 349 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 GPR82Q96P67 336 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 GFRA4Q9GZZ7 299 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 ARRDC1-AS1Q9H2J1 176 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 RPP21Q9H633 154 aaKnown RBP6.83□□□□□ -1.32
VPS50-208ENST00000458707 LINC00312Q9Y6C7 94 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 ICE1Q9Y2F5 2266 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 PRRC2CQ9Y520 2896 aaKnown RBP6.83□□□□□ -1.32
VPS50-208ENST00000458707 FAM231BA6NCW3 169 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 OR4C46A6NHA9 309 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 A8MWL6 223 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 SYS1-DBNDD2H3BUS1 97 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 SAP30O75446 220 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 IGLC1P0CG04 106 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 ARL3P36405 182 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 CAMPP49913 170 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 SUB1P53999 127 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS50-208ENST00000458707 TIMM23BQ5SRD1 257 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 TEX36Q5VZQ5 186 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 PVRIGQ6DKI7 326 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 PDPNQ86YL7 162 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 ZCCHC24Q8N2G6 241 aaKnown RBP6.83□□□□□ -1.32
VPS50-208ENST00000458707 NPIPB3Q92617 1050 aa6.83□□□□□ -1.32
VPS50-208ENST00000458707 MRPL20Q9BYC9 149 aaKnown RBP6.83□□□□□ -1.32
VPS50-208ENST00000458707 IGHV1-24A0A0C4DH33 117 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 hADV38S2A0JD32 116 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 MBD3L4A6NDZ8 208 aaPredicted RBP6.82□□□□□ -1.32
VPS50-208ENST00000458707 MBD3L3A6NE82 208 aaPredicted RBP6.82□□□□□ -1.32
VPS50-208ENST00000458707 MBD3L5A6NJ08 208 aaPredicted RBP6.82□□□□□ -1.32
VPS50-208ENST00000458707 LTAP01374 205 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 GNG5P63218 68 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 LINC00305Q7Z4B0 112 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 FAM216BQ8N7L0 139 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 MBD3L2Q8NHZ7 208 aaPredicted RBP6.82□□□□□ -1.32
VPS50-208ENST00000458707 VSTM2AQ8TAG5 236 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 PERPQ96FX8 193 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 FMC1Q96HJ9 113 aa6.82□□□□□ -1.32
VPS50-208ENST00000458707 CCL13Q99616 98 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms