RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 ZIC3O60481 467 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 SPINK4O60575 86 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 HBDP02042 147 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 IAPPP10997 89 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 PSMB2P49721 201 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 CLDN2P57739 230 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 KRTAP10-11P60412 298 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 ARL16Q0P5N6 197 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 C1orf61Q13536 156 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 CST6Q15828 149 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 ZNF793Q6ZN11 406 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 ACP7Q6ZNF0 438 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 FAM57AQ8TBR7 257 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 IGFBPL1Q8WX77 278 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 ELSPBP1Q96BH3 223 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 SNRNP40Q96DI7 357 aaKnown RBP4.5□□□□□ -1.69
HMGB4-202ENST00000458277 PRRG4Q9BZD6 226 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 EDA2RQ9HAV5 297 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 FGF22Q9HCT0 170 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 ZNF492Q9P255 531 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 PILRAQ9UKJ1 303 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 MDC1Q14676 2089 aaKnown RBP4.5□□□□□ -1.69
HMGB4-202ENST00000458277 ANAPC1Q9H1A4 1944 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 NLRC5Q86WI3 1866 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 NCKAP5O14513 1909 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 PTPRDP23468 1912 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 TRBV6-6A0A0A6YYG2 114 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 A0A1W2PPC4 97 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 HIGD1CA8MV81 97 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 K7ENP7 123 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 OVOL1O14753 267 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 MGST3O14880 152 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 APOHP02749 345 aaPredicted RBP4.49□□□□□ -1.69
HMGB4-202ENST00000458277 EMDP50402 254 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 DSCR4P56555 118 aaPredicted RBP4.49□□□□□ -1.69
HMGB4-202ENST00000458277 UBE2D3P61077 147 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 UBE2D2P62837 147 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 MRPS21P82921 87 aaKnown RBP4.49□□□□□ -1.69
HMGB4-202ENST00000458277 C1orf195Q5TG92 126 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 SIGLEC15Q6ZMC9 328 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 ZNF818PQ6ZRF7 136 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 SLC25A48Q6ZT89 311 aaKnown RBP4.49□□□□□ -1.69
HMGB4-202ENST00000458277 TRPT1Q86TN4 253 aaKnown RBP4.49□□□□□ -1.69
HMGB4-202ENST00000458277 PRIMA1Q86XR5 153 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 URB1-AS1Q96HZ7 61 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 RITA1Q96K30 269 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 CARD19Q96LW7 228 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 MRPL20Q9BYC9 149 aaKnown RBP4.49□□□□□ -1.69
HMGB4-202ENST00000458277 RNASE7Q9H1E1 156 aaKnown RBP4.49□□□□□ -1.69
HMGB4-202ENST00000458277 ZNF442Q9H7R0 627 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 TMEM74BQ9NUR3 256 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 EPDR1Q9UM22 224 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 TCF19Q9Y242 345 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 TIMM13Q9Y5L4 95 aaPredicted RBP4.49□□□□□ -1.69
HMGB4-202ENST00000458277 DOCK3Q8IZD9 2030 aa4.49□□□□□ -1.69
HMGB4-202ENST00000458277 MKI67P46013 3256 aaKnown RBP4.48□□□□□ -1.69
HMGB4-202ENST00000458277 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.48□□□□□ -1.69
HMGB4-202ENST00000458277 HSPB6O14558 160 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 NBR2O15453 112 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 SLC25A20O43772 301 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 ACTL6BO94805 426 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 IGLV3-1P01715 115 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 IGKCP01834 107 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 GP1BBP13224 206 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 CTLA4P16410 223 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 PSMB8P28062 276 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 RPS27P42677 84 aaKnown RBP4.48□□□□□ -1.69
HMGB4-202ENST00000458277 UBE2L3P68036 154 aaKnown RBP4.48□□□□□ -1.69
HMGB4-202ENST00000458277 MRPS36P82909 103 aaKnown RBP4.48□□□□□ -1.69
HMGB4-202ENST00000458277 OR1C1Q15619 314 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 ANXA2RQ3ZCQ2 193 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 TMEM52BQ4KMG9 183 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 CXCL17Q6UXB2 119 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 ABHD12Q8N2K0 398 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.48□□□□□ -1.69
HMGB4-202ENST00000458277 BORCS8Q96FH0 119 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 DPH3Q96FX2 82 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 IGF2BP2-AS1Q96M15 143 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 SRSF8Q9BRL6 282 aaKnown RBP4.48□□□□□ -1.69
HMGB4-202ENST00000458277 SIRPDQ9H106 197 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 RPP21Q9H633 154 aaKnown RBP4.48□□□□□ -1.69
HMGB4-202ENST00000458277 ZMAT4Q9H898 229 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 JPT2Q9H910 190 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 FOXA2Q9Y261 457 aaPredicted RBP4.48□□□□□ -1.69
HMGB4-202ENST00000458277 TP53TG1Q9Y2A0 90 aa4.48□□□□□ -1.69
HMGB4-202ENST00000458277 OBSL1O75147 1896 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 VWA8A3KMH1 1905 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 IGHV3OR15-7A0A075B7D8 119 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 TMED7-TICAM2A0A0A6YYA0 188 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 TRAV8-1A0A0A6YYK1 113 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 LOC107984156A0A0G2JMH3 177 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 LOC107984640A0A0U1RRK4 108 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 PMS2P5A8MQ11 134 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 MS4A18H0YCH9 400 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 TIMM23O14925 209 aa4.47□□□□□ -1.69
HMGB4-202ENST00000458277 ENSAO43768 121 aaKnown RBP4.47□□□□□ -1.69
HMGB4-202ENST00000458277 CCL5P13501 91 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms