RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 DEFB127Q9H1M4 99 aa4.21□□□□□ -1.74
VPS41-209ENST00000457055 PARLQ9H300 379 aa4.21□□□□□ -1.74
VPS41-209ENST00000457055 PLEKHA3Q9HB20 300 aa4.21□□□□□ -1.74
VPS41-209ENST00000457055 C21orf62Q9NYP8 219 aa4.21□□□□□ -1.74
VPS41-209ENST00000457055 OR5V1Q9UGF6 321 aa4.21□□□□□ -1.74
VPS41-209ENST00000457055 ANAPC10Q9UM13 185 aa4.21□□□□□ -1.74
VPS41-209ENST00000457055 OR2W1Q9Y3N9 320 aa4.21□□□□□ -1.74
VPS41-209ENST00000457055 KCNE3Q9Y6H6 103 aa4.21□□□□□ -1.74
VPS41-209ENST00000457055 TDRD15B5MCY1 1934 aaKnown RBP4.21□□□□□ -1.74
VPS41-209ENST00000457055 GREB1Q4ZG55 1949 aa4.21□□□□□ -1.74
VPS41-209ENST00000457055 TRAV13-1A0A0B4J241 112 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 A0A0J9YW62 118 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 TRBV7-6A0A0J9YX20 115 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 TLCD2A6NGC4 264 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 A8MWV9 139 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 H3BRM9 83 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 APOC4-APOC2K7ER74 178 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 TIMM23O14925 209 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 DUSP14O95147 198 aaKnown RBP4.2□□□□□ -1.74
VPS41-209ENST00000457055 APOC2P02655 101 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 TRGC2P03986 189 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 H2AFZP0C0S5 128 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 SFTA3P0C7M3 94 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 LINC00271P0C7V0 271 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 SLC25A6P12236 298 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 HLA-DOBP13765 273 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 YPEL3P61236 119 aaPredicted RBP4.2□□□□□ -1.74
VPS41-209ENST00000457055 SRSF9Q13242 221 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS41-209ENST00000457055 ABCA11PQ4W5N1 156 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 C22orf39Q6P5X5 142 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 C9orf47Q6ZRZ4 202 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 CLEC20AQ6ZU45 233 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 VN1R4Q7Z5H5 301 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 RFESDQ8TAC1 157 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 CCL17Q92583 94 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 MAL2Q969L2 176 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 LYZL4Q96KX0 146 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 MCEEQ96PE7 176 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 MAP6D1Q9H9H5 199 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 RABAC1Q9UI14 185 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 RARRES3Q9UL19 164 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 VSIG4Q9Y279 399 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 DOPEY1Q5JWR5 2465 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 LAMA5O15230 3695 aa4.2□□□□□ -1.74
VPS41-209ENST00000457055 PCNX2A6NKB5 2137 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 NUP205Q92621 2012 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 ATG2BQ96BY7 2078 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 IRGMA1A4Y4 181 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 RBMY1BA6NDE4 496 aaKnown RBP4.19□□□□□ -1.74
VPS41-209ENST00000457055 RBMY1EA6NEQ0 496 aaKnown RBP4.19□□□□□ -1.74
VPS41-209ENST00000457055 LYRM1O43325 122 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 PITX3O75364 302 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 NDUFB6O95139 128 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 TRACP01848 142 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 CD55P08174 381 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 RBMY1DP0C7P1 496 aaKnown RBP4.19□□□□□ -1.74
VPS41-209ENST00000457055 RBMY1A1P0DJD3 496 aaKnown RBP4.19□□□□□ -1.74
VPS41-209ENST00000457055 FABP2P12104 132 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 RPL22P35268 128 aaKnown RBP4.19□□□□□ -1.74
VPS41-209ENST00000457055 ASIPP42127 132 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 NANOS2P60321 138 aaKnown RBP4.19□□□□□ -1.74
VPS41-209ENST00000457055 ELOCQ15369 112 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 SPATA45Q537H7 98 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 UBE2NLQ5JXB2 153 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 LINC00305Q7Z4B0 112 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 OR11H7Q8NGC8 314 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 IGFBPL1Q8WX77 278 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 MUCL1Q96DR8 90 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 GNPNAT1Q96EK6 184 aaPredicted RBP4.19□□□□□ -1.74
VPS41-209ENST00000457055 CALYQ9NYX4 217 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 CKLFQ9UBR5 152 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 SPAG17Q6Q759 2223 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 PLXNB3Q9ULL4 1909 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 DSPPQ9NZW4 1301 aa4.19□□□□□ -1.74
VPS41-209ENST00000457055 TMEM131Q92545 1883 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 DOCK5Q9H7D0 1870 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 FREM2Q5SZK8 3169 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 TRBV20-1A0A075B6N2 111 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 IGKV1D-8A0A087WSZ0 117 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 TRAV8-3A0A0A6YYJ7 113 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 H0Y9J4 135 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 M0R2P5 195 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 UBE2L6O14933 153 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 SOCS1O15524 211 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 CRYGAP11844 174 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 OPRM1P35372 400 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 CA7P43166 264 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 PSMB3P49720 205 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 TAS2R45P59539 299 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 TGIF1Q15583 401 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 SP6Q3SY56 376 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 MRPL2Q5T653 305 aaKnown RBP4.18□□□□□ -1.74
VPS41-209ENST00000457055 C1orf140Q5VVS0 124 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 ZNF57Q68EA5 555 aaPredicted RBP4.18□□□□□ -1.74
VPS41-209ENST00000457055 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 WDR86Q86TI4 376 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 C1orf174Q8IYL3 243 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 ZC2HC1AQ96GY0 325 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 C18orf15Q96N68 181 aa4.18□□□□□ -1.74
VPS41-209ENST00000457055 OR2A5Q96R48 311 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms