RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 RBMY1A1P0DJD3 496 aaKnown RBP14.06□□□□□ -0.16
USP40-207ENST00000450940 RBMY1CP0DJD4 496 aa14.06□□□□□ -0.16
USP40-207ENST00000450940 HLA-DRB4P13762 266 aa14.06□□□□□ -0.16
USP40-207ENST00000450940 RBMY1FQ15415 496 aaKnown RBP14.06□□□□□ -0.16
USP40-207ENST00000450940 C4orf46Q504U0 113 aa14.06□□□□□ -0.16
USP40-207ENST00000450940 TMEM144Q7Z5S9 345 aa14.06□□□□□ -0.16
USP40-207ENST00000450940 MITD1Q8WV92 249 aa14.06□□□□□ -0.16
USP40-207ENST00000450940 HLA-DRB4X5D2U9 266 aa14.06□□□□□ -0.16
USP40-207ENST00000450940 ID1P41134 155 aa14.05□□□□□ -0.16
USP40-207ENST00000450940 PSMB3P49720 205 aa14.05□□□□□ -0.16
USP40-207ENST00000450940 PAX9P55771 341 aa14.05□□□□□ -0.16
USP40-207ENST00000450940 NUTF2P61970 127 aaKnown RBP14.05□□□□□ -0.16
USP40-207ENST00000450940 TMEM182Q6ZP80 229 aaPredicted RBP14.05□□□□□ -0.16
USP40-207ENST00000450940 ACOT7LQ6ZUV0 252 aa14.05□□□□□ -0.16
USP40-207ENST00000450940 OR8I2Q8N0Y5 310 aa14.05□□□□□ -0.16
USP40-207ENST00000450940 CLUHP3Q96NS8 147 aa14.05□□□□□ -0.16
USP40-207ENST00000450940 C1QTNF4Q9BXJ3 329 aa14.05□□□□□ -0.16
USP40-207ENST00000450940 PSENENQ9NZ42 101 aa14.05□□□□□ -0.16
USP40-207ENST00000450940 IGHV4-28A0A0C4DH34 117 aa14.04□□□□□ -0.16
USP40-207ENST00000450940 TMEM14EPQ6UXP3 125 aa14.04□□□□□ -0.16
USP40-207ENST00000450940 BPIFCQ8NFQ6 507 aa14.04□□□□□ -0.16
USP40-207ENST00000450940 CLEC5AQ9NY25 188 aa14.04□□□□□ -0.16
USP40-207ENST00000450940 TBC1D24Q9ULP9 559 aa14.04□□□□□ -0.16
USP40-207ENST00000450940 ZNF98A6NK75 572 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 ISLRO14498 428 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 LYRM1O43325 122 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 SSSCA1O60232 199 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 LY6G6CO95867 125 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 TAS2R30P59541 319 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 AKR1C1Q04828 323 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 SAMD13Q5VXD3 122 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 PPP1R14BQ96C90 147 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 C17orf77Q96MU5 243 aa14.03□□□□□ -0.16
USP40-207ENST00000450940 SAV1Q9H4B6 383 aaPredicted RBP14.03□□□□□ -0.16
USP40-207ENST00000450940 FNDC10F2Z333 226 aa14.02□□□□□ -0.17
USP40-207ENST00000450940 GATA2P23769 480 aaPredicted RBP14.02□□□□□ -0.17
USP40-207ENST00000450940 MEOX2P50222 304 aa14.02□□□□□ -0.17
USP40-207ENST00000450940 IAH1Q2TAA2 248 aaPredicted RBP14.02□□□□□ -0.17
USP40-207ENST00000450940 GDF5OSQ5U4N7 250 aa14.02□□□□□ -0.17
USP40-207ENST00000450940 SPATA31B1PQ5VZV4 182 aa14.02□□□□□ -0.17
USP40-207ENST00000450940 FOXI2Q6ZQN5 318 aa14.02□□□□□ -0.17
USP40-207ENST00000450940 LINC00299Q6ZSB3 139 aa14.02□□□□□ -0.17
USP40-207ENST00000450940 ZBTB8BQ8NAP8 495 aaPredicted RBP14.02□□□□□ -0.17
USP40-207ENST00000450940 C20orf85Q9H1P6 137 aa14.02□□□□□ -0.17
USP40-207ENST00000450940 BIRC6Q9NR09 4857 aa14.01□□□□□ -0.17
USP40-207ENST00000450940 ELOA3CA0A087WX78 387 aaPredicted RBP14.01□□□□□ -0.17
USP40-207ENST00000450940 PLP1P60201 277 aa14.01□□□□□ -0.17
USP40-207ENST00000450940 DLK1P80370 383 aa14.01□□□□□ -0.17
USP40-207ENST00000450940 LINC00052Q96N35 136 aa14.01□□□□□ -0.17
USP40-207ENST00000450940 GPR82Q96P67 336 aa14.01□□□□□ -0.17
USP40-207ENST00000450940 SLC25A32Q9H2D1 315 aa14.01□□□□□ -0.17
USP40-207ENST00000450940 XCL2Q9UBD3 114 aa14.01□□□□□ -0.17
USP40-207ENST00000450940 TSC22D2O75157 780 aa14□□□□□ -0.17
USP40-207ENST00000450940 TCRBP04435 133 aa14□□□□□ -0.17
USP40-207ENST00000450940 ORM2P19652 201 aa14□□□□□ -0.17
USP40-207ENST00000450940 S100A7P31151 101 aa14□□□□□ -0.17
USP40-207ENST00000450940 GALR1P47211 349 aa14□□□□□ -0.17
USP40-207ENST00000450940 DEFB1P60022 68 aa14□□□□□ -0.17
USP40-207ENST00000450940 LGALS9CQ6DKI2 356 aa14□□□□□ -0.17
USP40-207ENST00000450940 ZNF705AQ6ZN79 300 aaPredicted RBP14□□□□□ -0.17
USP40-207ENST00000450940 CYP2G1PQ6ZSU1 146 aa14□□□□□ -0.17
USP40-207ENST00000450940 RCL1Q9Y2P8 373 aaKnown RBP14□□□□□ -0.17
USP40-207ENST00000450940 C11orf94C9JXX5 98 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 K7EPK0 472 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 CCNKO75909 580 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 TCTAP57738 103 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 SELENOTP62341 195 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 OR1B1Q8NGR6 318 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 C2CD4CQ8TF44 421 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 NEU1Q99519 415 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 RSG1Q9BU20 258 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 CCDC32Q9BV29 185 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 TMEM147Q9BVK8 224 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 NPVFQ9HCQ7 196 aa13.99□□□□□ -0.17
USP40-207ENST00000450940 A8MTW9 85 aa13.98□□□□□ -0.17
USP40-207ENST00000450940 MBPP02686 304 aaPredicted RBP13.98□□□□□ -0.17
USP40-207ENST00000450940 IL5P05113 134 aa13.98□□□□□ -0.17
USP40-207ENST00000450940 METTL15P1P0C7V9 234 aa13.98□□□□□ -0.17
USP40-207ENST00000450940 ZNF709Q8N972 641 aa13.98□□□□□ -0.17
USP40-207ENST00000450940 SLC25A22Q9H936 323 aa13.98□□□□□ -0.17
USP40-207ENST00000450940 GSKIPQ9P0R6 139 aa13.98□□□□□ -0.17
USP40-207ENST00000450940 VPS13DQ5THJ4 4388 aa13.98□□□□□ -0.17
USP40-207ENST00000450940 KMT2AQ03164 3969 aa13.98□□□□□ -0.17
USP40-207ENST00000450940 A0A0J9YX75 114 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 SMCO3A2RU48 225 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 C7orf66A4D0T2 115 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 ZNF705FA8MVS1 300 aaPredicted RBP13.97□□□□□ -0.17
USP40-207ENST00000450940 H3BRN7 92 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 SCGB1D2O95969 90 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 ZNF705DP0CH99 300 aaPredicted RBP13.97□□□□□ -0.17
USP40-207ENST00000450940 ZNF705BP0CI00 300 aaPredicted RBP13.97□□□□□ -0.17
USP40-207ENST00000450940 HLA-DMBP28068 263 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 GSG1LQ6UXU4 331 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 OR10P1Q8NGE3 313 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 C20orf173Q96LM9 149 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 SHANK2-AS3Q9BTD1 123 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 SLC25A39Q9BZJ4 359 aaPredicted RBP13.97□□□□□ -0.17
USP40-207ENST00000450940 RPRMQ9NS64 109 aa13.97□□□□□ -0.17
USP40-207ENST00000450940 HYPMO75409 117 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms