RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 IGKV3D-20A0A0C4DH25 116 aa15.34■□□□□ 0.05
SHANK3-203ENST00000445220 A0A1B0GUS0 222 aa15.34■□□□□ 0.05
SHANK3-203ENST00000445220 IGHV1-2P23083 117 aa15.34■□□□□ 0.05
SHANK3-203ENST00000445220 LY6EQ16553 131 aa15.34■□□□□ 0.05
SHANK3-203ENST00000445220 DOCK6Q96HP0 2047 aa15.34■□□□□ 0.05
SHANK3-203ENST00000445220 ABCA7Q8IZY2 2146 aa15.34■□□□□ 0.05
SHANK3-203ENST00000445220 MMP23AO75900 390 aa15.34■□□□□ 0.05
SHANK3-203ENST00000445220 ZNF138P52744 262 aa15.34■□□□□ 0.05
SHANK3-203ENST00000445220 FOXF2Q12947 444 aa15.34■□□□□ 0.05
SHANK3-203ENST00000445220 GBF1Q92538 1859 aa15.33■□□□□ 0.05
SHANK3-203ENST00000445220 MLNRO43193 412 aa15.33■□□□□ 0.04
SHANK3-203ENST00000445220 Q6ZWC4 215 aa15.33■□□□□ 0.04
SHANK3-203ENST00000445220 C18orf32Q8TCD1 76 aa15.33■□□□□ 0.04
SHANK3-203ENST00000445220 ATP6V0BQ99437 205 aa15.33■□□□□ 0.04
SHANK3-203ENST00000445220 MCRIP2Q9BUT9 160 aaKnown RBP15.33■□□□□ 0.04
SHANK3-203ENST00000445220 LSM4Q9Y4Z0 139 aaKnown RBP15.33■□□□□ 0.04
SHANK3-203ENST00000445220 SBF1O95248 1867 aa15.33■□□□□ 0.04
SHANK3-203ENST00000445220 NBR2O15453 112 aa15.33■□□□□ 0.04
SHANK3-203ENST00000445220 FXYD7P58549 80 aa15.33■□□□□ 0.04
SHANK3-203ENST00000445220 FAM27E3Q08E93 113 aa15.33■□□□□ 0.04
SHANK3-203ENST00000445220 C17orf82Q86X59 251 aaPredicted RBP15.33■□□□□ 0.04
SHANK3-203ENST00000445220 HIST1H4AP62805 103 aaKnown RBP15.33■□□□□ 0.04
SHANK3-203ENST00000445220 NEU4Q8WWR8 484 aaPredicted RBP15.33■□□□□ 0.04
SHANK3-203ENST00000445220 IGKV1-27A0A075B6S5 117 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 NTN3O00634 580 aaPredicted RBP15.32■□□□□ 0.04
SHANK3-203ENST00000445220 ASCL4Q6XD76 172 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 ZNF318Q5VUA4 2279 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 CFAP161Q6P656 301 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 C1orf122Q6ZSJ8 110 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 IGHV3-64A0A075B6Q5 118 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 CCL3L1P16619 93 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 DOCK4Q8N1I0 1966 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 CFHR1Q03591 330 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 C9orf153Q5TBE3 101 aa15.32■□□□□ 0.04
SHANK3-203ENST00000445220 KLF2Q9Y5W3 355 aaPredicted RBP15.32■□□□□ 0.04
SHANK3-203ENST00000445220 K7EP34 96 aa15.31■□□□□ 0.04
SHANK3-203ENST00000445220 KIF26BQ2KJY2 2108 aa15.31■□□□□ 0.04
SHANK3-203ENST00000445220 C9orf172C9J069 976 aa15.31■□□□□ 0.04
SHANK3-203ENST00000445220 C9JAW5 83 aa15.31■□□□□ 0.04
SHANK3-203ENST00000445220 CELA3BP08861 270 aa15.31■□□□□ 0.04
SHANK3-203ENST00000445220 NTF4P34130 210 aa15.31■□□□□ 0.04
SHANK3-203ENST00000445220 S100A7L2Q5SY68 101 aa15.31■□□□□ 0.04
SHANK3-203ENST00000445220 ZNF48Q96MX3 618 aaPredicted RBP15.31■□□□□ 0.04
SHANK3-203ENST00000445220 ATP5J2P56134 94 aa15.31■□□□□ 0.04
SHANK3-203ENST00000445220 TMEM158Q8WZ71 300 aa15.31■□□□□ 0.04
SHANK3-203ENST00000445220 F8W1H4 67 aa15.3■□□□□ 0.04
SHANK3-203ENST00000445220 EXOC3-AS1Q8N2X6 119 aa15.3■□□□□ 0.04
SHANK3-203ENST00000445220 STPG4Q8N801 248 aa15.3■□□□□ 0.04
SHANK3-203ENST00000445220 PMS2P5A8MQ11 134 aa15.3■□□□□ 0.04
SHANK3-203ENST00000445220 CFPP27918 469 aa15.3■□□□□ 0.04
SHANK3-203ENST00000445220 GFRA4Q9GZZ7 299 aa15.3■□□□□ 0.04
SHANK3-203ENST00000445220 MDC1Q14676 2089 aaKnown RBP15.3■□□□□ 0.04
SHANK3-203ENST00000445220 YPEL3P61236 119 aaPredicted RBP15.3■□□□□ 0.04
SHANK3-203ENST00000445220 RTTNQ86VV8 2226 aa15.3■□□□□ 0.04
SHANK3-203ENST00000445220 TRBV6-6A0A0A6YYG2 114 aa15.3■□□□□ 0.04
SHANK3-203ENST00000445220 C9orf106Q8NAJ2 232 aa15.3■□□□□ 0.04
SHANK3-203ENST00000445220 Q6ZS49 121 aa15.29■□□□□ 0.04
SHANK3-203ENST00000445220 LINC01560Q8TB33 94 aa15.29■□□□□ 0.04
SHANK3-203ENST00000445220 PPDPFLQ8WWR9 84 aa15.29■□□□□ 0.04
SHANK3-203ENST00000445220 C15orf62A8K5M9 175 aa15.29■□□□□ 0.04
SHANK3-203ENST00000445220 TMEM42Q69YG0 159 aa15.29■□□□□ 0.04
SHANK3-203ENST00000445220 ETDBQ3ZM63 59 aa15.29■□□□□ 0.04
SHANK3-203ENST00000445220 TRGV9Q99603 122 aa15.29■□□□□ 0.04
SHANK3-203ENST00000445220 ESPL1Q14674 2120 aa15.29■□□□□ 0.04
SHANK3-203ENST00000445220 TMEM8BA6NDV4 472 aa15.29■□□□□ 0.04
SHANK3-203ENST00000445220 A0A0U1RRA0 63 aa15.28■□□□□ 0.04
SHANK3-203ENST00000445220 CDKN1BP46527 198 aa15.28■□□□□ 0.04
SHANK3-203ENST00000445220 SCRT1Q9BWW7 348 aa15.28■□□□□ 0.04
SHANK3-203ENST00000445220 IGKV2-40A0A087WW87 121 aaPredicted RBP15.28■□□□□ 0.04
SHANK3-203ENST00000445220 IGHV2-26A0A0B4J1V2 119 aa15.28■□□□□ 0.04
SHANK3-203ENST00000445220 C17orf100A8MU93 164 aa15.28■□□□□ 0.04
SHANK3-203ENST00000445220 TOMM40O96008 361 aa15.28■□□□□ 0.04
SHANK3-203ENST00000445220 IGKV2D-40P01614 121 aaPredicted RBP15.28■□□□□ 0.04
SHANK3-203ENST00000445220 A0A0G2JRQ6 117 aa15.28■□□□□ 0.04
SHANK3-203ENST00000445220 TRBV20-1A0A075B6N2 111 aa15.27■□□□□ 0.04
SHANK3-203ENST00000445220 BSPH1Q075Z2 132 aa15.27■□□□□ 0.04
SHANK3-203ENST00000445220 SLAQ13239 276 aa15.27■□□□□ 0.04
SHANK3-203ENST00000445220 TEX43Q6ZNM6 134 aa15.27■□□□□ 0.04
SHANK3-203ENST00000445220 TMEM86BQ8N661 226 aa15.27■□□□□ 0.04
SHANK3-203ENST00000445220 ABHD17AQ96GS6 310 aa15.27■□□□□ 0.04
SHANK3-203ENST00000445220 TMEM133Q9H2Q1 129 aa15.27■□□□□ 0.04
SHANK3-203ENST00000445220 NABP1Q96AH0 204 aa15.27■□□□□ 0.04
SHANK3-203ENST00000445220 GAGE12HA6NDE8 117 aa15.27■□□□□ 0.03
SHANK3-203ENST00000445220 TFF1P04155 84 aa15.27■□□□□ 0.03
SHANK3-203ENST00000445220 IGLL1P15814 213 aa15.27■□□□□ 0.03
SHANK3-203ENST00000445220 LINC01587Q99440 93 aa15.27■□□□□ 0.03
SHANK3-203ENST00000445220 GLMPQ8WWB7 406 aa15.27■□□□□ 0.03
SHANK3-203ENST00000445220 OVOL1O14753 267 aa15.26■□□□□ 0.03
SHANK3-203ENST00000445220 SH2D1AO60880 128 aa15.26■□□□□ 0.03
SHANK3-203ENST00000445220 TNFRSF14Q92956 283 aa15.26■□□□□ 0.03
SHANK3-203ENST00000445220 RNF144BQ7Z419 303 aa15.26■□□□□ 0.03
SHANK3-203ENST00000445220 Q6ZRM9 215 aa15.26■□□□□ 0.03
SHANK3-203ENST00000445220 FGFBP3Q8TAT2 258 aa15.26■□□□□ 0.03
SHANK3-203ENST00000445220 SIP14410 1827 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 FNDC10F2Z333 226 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 AMN1Q8IY45 258 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 ANK1P16157 1881 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 TRAV8-3A0A0A6YYJ7 113 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 LHFPL4Q7Z7J7 247 aa15.25■□□□□ 0.03
SHANK3-203ENST00000445220 OVOL2Q9BRP0 275 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms