RNA–Protein interactions for RNA: ENST00000438097.6

UBE3A-204, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 8,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-204ENST00000438097 THAP8Q8NA92 274 aa11.66□□□□□ -0.54
UBE3A-204ENST00000438097 CD200R1LQ6Q8B3 271 aa11.66□□□□□ -0.54
UBE3A-204ENST00000438097 EFNA4P52798 201 aa11.66□□□□□ -0.54
UBE3A-204ENST00000438097 CCDC168Q8NDH2 2452 aa11.66□□□□□ -0.54
UBE3A-204ENST00000438097 TGIF1Q15583 401 aa11.66□□□□□ -0.54
UBE3A-204ENST00000438097 KLHL30-AS1Q8NEE0 82 aa11.66□□□□□ -0.54
UBE3A-204ENST00000438097 TSKUQ8WUA8 353 aa11.66□□□□□ -0.54
UBE3A-204ENST00000438097 MCRIP2Q9BUT9 160 aaKnown RBP11.66□□□□□ -0.54
UBE3A-204ENST00000438097 MUC6Q6W4X9 2439 aa11.66□□□□□ -0.54
UBE3A-204ENST00000438097 H2BFSP57053 126 aa11.66□□□□□ -0.54
UBE3A-204ENST00000438097 IGLV3-21P80748 117 aaPredicted RBP11.65□□□□□ -0.54
UBE3A-204ENST00000438097 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
UBE3A-204ENST00000438097 C9orf139Q6ZV77 190 aa11.65□□□□□ -0.54
UBE3A-204ENST00000438097 FBLIM1Q8WUP2 373 aa11.65□□□□□ -0.54
UBE3A-204ENST00000438097 ZNF48Q96MX3 618 aaPredicted RBP11.65□□□□□ -0.54
UBE3A-204ENST00000438097 TRGV9Q99603 122 aa11.65□□□□□ -0.54
UBE3A-204ENST00000438097 SPANXCQ9NY87 97 aa11.65□□□□□ -0.54
UBE3A-204ENST00000438097 S4R3C0 116 aa11.65□□□□□ -0.54
UBE3A-204ENST00000438097 NDUFS8O00217 210 aa11.65□□□□□ -0.55
UBE3A-204ENST00000438097 ZNF138P52744 262 aa11.65□□□□□ -0.55
UBE3A-204ENST00000438097 IL17RELQ6ZVW7 336 aa11.65□□□□□ -0.55
UBE3A-204ENST00000438097 LYPD1Q8N2G4 141 aa11.65□□□□□ -0.55
UBE3A-204ENST00000438097 NOTCH4Q99466 2003 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 LHBP01229 141 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 PLPPR1Q8TBJ4 325 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 SIGLEC12Q96PQ1 595 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 IFI27L1Q96BM0 104 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 C17orf98A8MV24 154 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 ZIC3O60481 467 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 ZNF250P15622 560 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 PSG7Q13046 419 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 TMEM155Q4W5P6 130 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 NEGR1Q7Z3B1 354 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 VMO1Q7Z5L0 202 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 LHX2P50458 406 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 GZMMP51124 257 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 SRSF2Q01130 221 aaKnown RBP11.64□□□□□ -0.55
UBE3A-204ENST00000438097 SMIM10L1P0DMW3 83 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 SLC25A16P16260 332 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 SMIM10Q96HG1 83 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 EVI2AP22794 236 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 GPHA2Q96T91 129 aa11.64□□□□□ -0.55
UBE3A-204ENST00000438097 SRRM4A7MD48 611 aaKnown RBP11.63□□□□□ -0.55
UBE3A-204ENST00000438097 CENPVL1A0A0U1RR11 272 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 TIMP3P35625 211 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 DSCR8Q96T75 97 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 CRIM1Q9NZV1 1036 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 TRAV8-1A0A0A6YYK1 113 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 H3BUT2 72 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 MIR17HGQ75NE6 70 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 CITED2Q99967 270 aaPredicted RBP11.63□□□□□ -0.55
UBE3A-204ENST00000438097 UBE2WQ96B02 151 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 TIMM21Q9BVV7 248 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 RNASE7Q9H1E1 156 aaKnown RBP11.63□□□□□ -0.55
UBE3A-204ENST00000438097 PSG8Q9UQ74 426 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 IMMP1LQ96LU5 166 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 C2orf82Q6UX34 121 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 ZNF479Q96JC4 524 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
UBE3A-204ENST00000438097 C3orf36Q3SXR2 165 aa11.63□□□□□ -0.55
UBE3A-204ENST00000438097 CGB3P0DN86 165 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 CCL1P22362 96 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 SSBP2P81877 361 aaPredicted RBP11.62□□□□□ -0.55
UBE3A-204ENST00000438097 RHODO00212 210 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 CRYBA2P53672 197 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 TRBV6-7A0A0A0MS04 114 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 PDE6HQ13956 83 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 IGHV2-26A0A0B4J1V2 119 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 MRPL14Q6P1L8 145 aaKnown RBP11.62□□□□□ -0.55
UBE3A-204ENST00000438097 FAM19A2Q8N3H0 131 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 C22orf46C9J442 243 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 RAMP3O60896 148 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
UBE3A-204ENST00000438097 CD160O95971 181 aa11.61□□□□□ -0.55
UBE3A-204ENST00000438097 DAZ1Q9NQZ3 744 aaKnown RBP11.61□□□□□ -0.55
UBE3A-204ENST00000438097 RPL35AP18077 110 aaKnown RBP11.61□□□□□ -0.55
UBE3A-204ENST00000438097 IGLV3-19P01714 112 aa11.61□□□□□ -0.55
UBE3A-204ENST00000438097 ATP1A1-AS1Q5TC04 95 aa11.61□□□□□ -0.55
UBE3A-204ENST00000438097 SPACA3Q8IXA5 215 aa11.61□□□□□ -0.55
UBE3A-204ENST00000438097 FNDC4Q9H6D8 234 aaPredicted RBP11.61□□□□□ -0.55
UBE3A-204ENST00000438097 CDKN1AP38936 164 aa11.61□□□□□ -0.55
UBE3A-204ENST00000438097 CGB7P0DN87 165 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 CFHR1Q03591 330 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 TMEM242Q9NWH2 141 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 TIMM23O14925 209 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 TRBV25-1A0A075B6N4 114 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 MUC21A0A0G2JKD1 596 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 MUC21A0A140T8X8 626 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 C18orf12Q96KH6 178 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 NAV3Q8IVL0 2385 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 EFNB3Q15768 340 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 CCL3L1P16619 93 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 SFTA2Q6UW10 78 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 TMEM170AQ8WVE7 144 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 MEGF9Q9H1U4 602 aa11.6□□□□□ -0.55
UBE3A-204ENST00000438097 SUPT4H1P63272 117 aaKnown RBP11.59□□□□□ -0.55
UBE3A-204ENST00000438097 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.59□□□□□ -0.55
UBE3A-204ENST00000438097 SERF1AO75920 110 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms