RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 NRGNQ92686 78 aa4.83□□□□□ -1.64
SPEN-202ENST00000438066 RAB1CQ92928 201 aa4.83□□□□□ -1.64
SPEN-202ENST00000438066 BET1LQ9NYM9 111 aa4.83□□□□□ -1.64
SPEN-202ENST00000438066 PRNDQ9UKY0 176 aa4.83□□□□□ -1.64
SPEN-202ENST00000438066 TIMM9Q9Y5J7 89 aa4.83□□□□□ -1.64
SPEN-202ENST00000438066 WNK2Q9Y3S1 2297 aa4.83□□□□□ -1.64
SPEN-202ENST00000438066 PLXNB1O43157 2135 aa4.83□□□□□ -1.64
SPEN-202ENST00000438066 CRYBG3Q68DQ2 2970 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 CENPEQ02224 2701 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 RNASEK-C17orf49H0YIS7 233 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 UPK2O00526 184 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 AGPAT2O15120 278 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 KBTBD11O94819 623 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 APOC3P02656 99 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 REG1BP48304 166 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 HSPE1P61604 102 aaKnown RBP4.82□□□□□ -1.64
SPEN-202ENST00000438066 PRCDQ00LT1 54 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 HLA-DRB5Q30154 266 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 Q8N7P7 452 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 OR4C13Q8NGP0 309 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 SCGB1C1Q8TD33 95 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 SEC11CQ9BY50 192 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 PATZ1Q9HBE1 687 aaKnown RBP4.82□□□□□ -1.64
SPEN-202ENST00000438066 TREM1Q9NP99 234 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 RPRMQ9NS64 109 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 WASHC3Q9Y3C0 194 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 CELSR2Q9HCU4 2923 aa4.82□□□□□ -1.64
SPEN-202ENST00000438066 H7C2Y5 167 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 IGLV2-23P01705 113 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 SFTA3P0C7M3 94 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 M6PRP20645 277 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 IL3RAP26951 378 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 RAB13P51153 203 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 DLX1P56177 255 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 CCL20P78556 96 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 TLE4Q04727 773 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 ZNF726P1Q15940 193 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 GUCA2BQ16661 112 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 GUK1Q16774 197 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 BSXQ3C1V8 233 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 OR4P4Q8NGL7 312 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 OR5B3Q8NH48 314 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 TMEM167AQ8TBQ9 72 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 FLYWCH2Q96CP2 140 aaKnown RBP4.81□□□□□ -1.64
SPEN-202ENST00000438066 LITAFQ99732 161 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 GGACTQ9BVM4 153 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 NPCDR1Q9BY65 106 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 VSIRQ9H7M9 311 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 OR51B2Q9Y5P1 312 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 FAM208BQ5VWN6 2430 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 MED13LQ71F56 2210 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 SPG11Q96JI7 2443 aa4.81□□□□□ -1.64
SPEN-202ENST00000438066 MAP1AP78559 2803 aaPredicted RBP4.81□□□□□ -1.64
SPEN-202ENST00000438066 IGLV7-46A0A075B6I9 117 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 E9PLD3 99 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 F8W036 122 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 INS-IGF2F8WCM5 200 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 LY6LH3BQJ8 138 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 BUB1B-PAK6H3BSN5 160 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 M0R1W7 72 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 IFNA10P01566 189 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 IGKV1D-33P01593 117 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 IGKV1-33P01594 117 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 HBE1P02100 147 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 FGF7P21781 194 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 USF1P22415 310 aaPredicted RBP4.8□□□□□ -1.64
SPEN-202ENST00000438066 NPY1RP25929 384 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 CD1BP29016 333 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 EFNA4P52798 201 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 MRGPRG-AS1Q2M3A8 158 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 C9orf66Q5T8R8 295 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 SSX7Q7RTT5 188 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 SVBPQ8N300 66 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 RPP25LQ8N5L8 163 aaKnown RBP4.8□□□□□ -1.64
SPEN-202ENST00000438066 OR4A5Q8NH83 315 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 VSTM2AQ8TAG5 236 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 MBD3L1Q8WWY6 194 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 TBX15Q96SF7 602 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 PBDC1Q9BVG4 233 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 SMDT1Q9H4I9 107 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 FKBP11Q9NYL4 201 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 CHD6Q8TD26 2715 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 IGHV1-3A0A0C4DH29 117 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 LOC100131303A0A0U1RQF7 123 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 TEX50A0A1B0GTY4 177 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 A0A1B0GV50 99 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 ODF3BA8MYP8 253 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 FNDC10F2Z333 226 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 MPDU1O75352 247 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 CA2P00918 260 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 RNF224P0DH78 156 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 GPR6P46095 362 aaPredicted RBP4.8□□□□□ -1.64
SPEN-202ENST00000438066 RAB2AP61019 212 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 DEFA5Q01523 94 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 PRB3Q04118 309 aaPredicted RBP4.8□□□□□ -1.64
SPEN-202ENST00000438066 PEA15Q15121 130 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 LDLRAD2Q5SZI1 272 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 HCP5Q6MZN7 132 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 OR11H6Q8NGC7 330 aa4.8□□□□□ -1.64
SPEN-202ENST00000438066 CLDND2Q8NHS1 167 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms