RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 PSENENQ9NZ42 101 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 TRAV6A0A075B6T7 132 aa6.91□□□□□ -1.3
TRIM39-208ENST00000428555 DEFB4AO15263 64 aa6.91□□□□□ -1.3
TRIM39-208ENST00000428555 SSSCA1O60232 199 aa6.91□□□□□ -1.3
TRIM39-208ENST00000428555 TCRBP04435 133 aa6.91□□□□□ -1.3
TRIM39-208ENST00000428555 IAH1Q2TAA2 248 aaPredicted RBP6.91□□□□□ -1.3
TRIM39-208ENST00000428555 ZBTB8BQ8NAP8 495 aaPredicted RBP6.91□□□□□ -1.3
TRIM39-208ENST00000428555 PPP1R14BQ96C90 147 aa6.91□□□□□ -1.3
TRIM39-208ENST00000428555 SMIM8Q96KF7 97 aa6.91□□□□□ -1.3
TRIM39-208ENST00000428555 PPP1R14DQ9NXH3 145 aa6.91□□□□□ -1.3
TRIM39-208ENST00000428555 HYDINQ4G0P3 5121 aa6.91□□□□□ -1.3
TRIM39-208ENST00000428555 SMCO3A2RU48 225 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 PMS2P5A8MQ11 134 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 CCNKO75909 580 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 ORM2P19652 201 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 NUP62P37198 522 aaPredicted RBP6.9□□□□□ -1.3
TRIM39-208ENST00000428555 DEFB1P60022 68 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 SNRPD3P62318 126 aaKnown RBP6.9□□□□□ -1.3
TRIM39-208ENST00000428555 AKR1C1Q04828 323 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 C1orf194Q5T5A4 169 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 WDR73Q6P4I2 378 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 MORN3Q6PF18 240 aaPredicted RBP6.9□□□□□ -1.3
TRIM39-208ENST00000428555 CEMP1Q6PRD7 247 aaPredicted RBP6.9□□□□□ -1.3
TRIM39-208ENST00000428555 ACOT7LQ6ZUV0 252 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 OR8I2Q8N0Y5 310 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 TMEM217Q8N7C4 229 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 LINC00052Q96N35 136 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 KRTAP3-3Q9BYR6 98 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 C20orf85Q9H1P6 137 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 SEPSECSQ9HD40 501 aaKnown RBP6.9□□□□□ -1.3
TRIM39-208ENST00000428555 CLEC5AQ9NY25 188 aa6.9□□□□□ -1.3
TRIM39-208ENST00000428555 A6NHS1 94 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 H3BMM0 161 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 CCSO14618 274 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 JTBO76095 146 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 CFDP00746 253 aaPredicted RBP6.89□□□□□ -1.31
TRIM39-208ENST00000428555 MBPP02686 304 aaPredicted RBP6.89□□□□□ -1.31
TRIM39-208ENST00000428555 S100A6P06703 90 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 H2AFB2P0C5Z0 115 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 METTL15P1P0C7V9 234 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 SPP1P10451 314 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 C4BPBP20851 252 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 ID1P41134 155 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 NANOS2P60321 138 aaKnown RBP6.89□□□□□ -1.31
TRIM39-208ENST00000428555 RRAS2P62070 204 aaPredicted RBP6.89□□□□□ -1.31
TRIM39-208ENST00000428555 TMEM14EPQ6UXP3 125 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 TMEM144Q7Z5S9 345 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 BPIFCQ8NFQ6 507 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 SEC22CQ9BRL7 303 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 RSG1Q9BU20 258 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 CCDC32Q9BV29 185 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 NUDT15Q9NV35 164 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 FBXL17Q9UF56 701 aa6.89□□□□□ -1.31
TRIM39-208ENST00000428555 ALMS1Q8TCU4 4167 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 AGRNO00468 2067 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 FAM240BA0A1B0GVZ2 78 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 C7orf66A4D0T2 115 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 ZNF98A6NK75 572 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 IGKV3-20P01619 116 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 IL5P05113 134 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 RBMY1A1P0DJD3 496 aaKnown RBP6.88□□□□□ -1.31
TRIM39-208ENST00000428555 RBMY1CP0DJD4 496 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 TAS2R30P59541 319 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 ARL16Q0P5N6 197 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 RBMY1FQ15415 496 aaKnown RBP6.88□□□□□ -1.31
TRIM39-208ENST00000428555 GDF5OSQ5U4N7 250 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 LINC00299Q6ZSB3 139 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 CYP2G1PQ6ZSU1 146 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 C12orf45Q8N5I9 185 aaPredicted RBP6.88□□□□□ -1.31
TRIM39-208ENST00000428555 CSNK1G2-AS1Q8NCQ2 148 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 OR10P1Q8NGE3 313 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 OR1B1Q8NGR6 318 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 C11orf45Q8TAV5 145 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 ZNF431Q8TF32 576 aaPredicted RBP6.88□□□□□ -1.31
TRIM39-208ENST00000428555 PHLDA1Q8WV24 401 aaPredicted RBP6.88□□□□□ -1.31
TRIM39-208ENST00000428555 C17orf77Q96MU5 243 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 SLC25A22Q9H936 323 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 DOK5Q9P104 306 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 XCL2Q9UBD3 114 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 TBC1D24Q9ULP9 559 aa6.88□□□□□ -1.31
TRIM39-208ENST00000428555 IGHV4-28A0A0C4DH34 117 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 C5orf51A6NDU8 294 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 NUPR2A6NF83 97 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 SOCS3O14543 225 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 HLA-DRB4P13762 266 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 DLK1P80370 383 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 ZNF846Q147U1 533 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 TMEM41BQ5BJD5 291 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 S100ZQ8WXG8 99 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 TMEM147Q9BVK8 224 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 SLC25A32Q9H2D1 315 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 C11orf68Q9H3H3 251 aaKnown RBP6.87□□□□□ -1.31
TRIM39-208ENST00000428555 NPVFQ9HCQ7 196 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 SLC45A2Q9UMX9 530 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 RCL1Q9Y2P8 373 aaKnown RBP6.87□□□□□ -1.31
TRIM39-208ENST00000428555 HLA-DRB4X5D2U9 266 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 X6R8D5 127 aa6.87□□□□□ -1.31
TRIM39-208ENST00000428555 VPS13DQ5THJ4 4388 aa6.86□□□□□ -1.31
TRIM39-208ENST00000428555 ZNF705EA8MWA4 302 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms