RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 A0A1W2PPI3 338 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 ADORA2A-AS1P86434 159 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 HIGD1CA8MV81 97 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 FGF16O43320 207 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 FOLR2P14207 255 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 ADAMTS9Q9P2N4 1935 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 A0A087WWC5 75 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 MPDZO75970 2070 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 TDGF1P3P51864 188 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 SPATA31B1PQ5VZV4 182 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 GPR61Q9BZJ8 451 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
RPL28-202ENST00000426763 OSTCQ9NRP0 149 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 C5orf52A6NGY3 159 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 A8MXK9 166 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 CACNG7P62955 275 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 NDPQ00604 133 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 Q6ZRM9 215 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 KIAA2026Q5HYC2 2103 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 LRRK1Q38SD2 2015 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 A6NDN8 102 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 IGHV2-5P01817 119 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 C12orf54Q6X4T0 127 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 TMEM70Q9BUB7 260 aa11.22□□□□□ -0.61
RPL28-202ENST00000426763 C15orf65H3BRN8 121 aa11.21□□□□□ -0.61
RPL28-202ENST00000426763 IGHV2-70P01814 119 aa11.21□□□□□ -0.61
RPL28-202ENST00000426763 TCTAP57738 103 aa11.21□□□□□ -0.61
RPL28-202ENST00000426763 DAZ1Q9NQZ3 744 aaKnown RBP11.21□□□□□ -0.61
RPL28-202ENST00000426763 BDP1A6H8Y1 2624 aa11.21□□□□□ -0.61
RPL28-202ENST00000426763 ZNF688P0C7X2 276 aa11.21□□□□□ -0.61
RPL28-202ENST00000426763 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.61
RPL28-202ENST00000426763 ORMDL3Q8N138 153 aa11.21□□□□□ -0.62
RPL28-202ENST00000426763 RHPN1-AS1Q9BWJ2 59 aa11.21□□□□□ -0.62
RPL28-202ENST00000426763 DOCK7Q96N67 2140 aa11.21□□□□□ -0.62
RPL28-202ENST00000426763 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.62
RPL28-202ENST00000426763 ZGRF1Q86YA3 2104 aa11.21□□□□□ -0.62
RPL28-202ENST00000426763 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.62
RPL28-202ENST00000426763 CYTL1Q9NRR1 136 aa11.21□□□□□ -0.62
RPL28-202ENST00000426763 SELENOKQ9Y6D0 94 aa11.21□□□□□ -0.62
RPL28-202ENST00000426763 CNTFRP26992 372 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.2□□□□□ -0.62
RPL28-202ENST00000426763 NDUFS7O75251 213 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 COL4A3Q01955 1670 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 IGKV2-40A0A087WW87 121 aaPredicted RBP11.2□□□□□ -0.62
RPL28-202ENST00000426763 OVOL3O00110 214 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 IGKV2D-40P01614 121 aaPredicted RBP11.2□□□□□ -0.62
RPL28-202ENST00000426763 C1orf122Q6ZSJ8 110 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 TRAV1-1A0A0B4J248 108 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 OR11H12B2RN74 326 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
RPL28-202ENST00000426763 EXOC3-AS1Q8N2X6 119 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
RPL28-202ENST00000426763 A0A087X0M5 115 aa11.19□□□□□ -0.62
RPL28-202ENST00000426763 A0A1B0GX30 115 aa11.19□□□□□ -0.62
RPL28-202ENST00000426763 SYNJ2BPP57105 145 aa11.19□□□□□ -0.62
RPL28-202ENST00000426763 SUMO2P61956 95 aaKnown RBP11.19□□□□□ -0.62
RPL28-202ENST00000426763 CIRBPQ14011 172 aaKnown RBP11.19□□□□□ -0.62
RPL28-202ENST00000426763 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
RPL28-202ENST00000426763 APOHP02749 345 aaPredicted RBP11.19□□□□□ -0.62
RPL28-202ENST00000426763 PARD6GQ9BYG4 376 aaPredicted RBP11.19□□□□□ -0.62
RPL28-202ENST00000426763 NDUFA4L2Q9NRX3 87 aa11.19□□□□□ -0.62
RPL28-202ENST00000426763 TRGV4A0A0C4DH28 118 aa11.19□□□□□ -0.62
RPL28-202ENST00000426763 RPP25LQ8N5L8 163 aaKnown RBP11.19□□□□□ -0.62
RPL28-202ENST00000426763 OCC1Q8TAD7 63 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 C2orf88Q9BSF0 95 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 LYPD1Q8N2G4 141 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 OR4C5Q8NGB2 326 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 TMEM238LA0A1B0GVL6 79 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 C7orf71A4D174 169 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 A6NJY4 79 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 F2Z2F3 143 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 ZNF138P52744 262 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 COPS9Q8WXC6 57 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 SPOCK3Q9BQ16 436 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 ATP5LO75964 103 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 PKIAP61925 76 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 AGMATQ9BSE5 352 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 GTF3C1Q12789 2109 aa11.18□□□□□ -0.62
RPL28-202ENST00000426763 C22orf46C9J442 243 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 MMP23AO75900 390 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 DAZAP2Q15038 168 aaPredicted RBP11.17□□□□□ -0.62
RPL28-202ENST00000426763 SEM1Q6ZVN7 128 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 NPIPB5A8MRT5 1133 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 TCRAP04437 139 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 C11orf53Q8IXP5 236 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 ALKBH7Q9BT30 221 aaPredicted RBP11.17□□□□□ -0.62
RPL28-202ENST00000426763 ZNF256Q9Y2P7 627 aaPredicted RBP11.17□□□□□ -0.62
RPL28-202ENST00000426763 LINC01619G3V211 115 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 TMEM50AO95807 157 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 MLANAQ16655 118 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 KRTAP27-1Q3LI81 207 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 ACTL10Q5JWF8 245 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 RAB37Q96AX2 223 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 IMMP2LQ96T52 175 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 PRORYQ9H606 182 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 LYL1P12980 280 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms