RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TOMM20LQ6UXN7 152 aa7.97□□□□□ -1.13
MDC1-205ENST00000425072 C4orf3Q8WVX3 66 aa7.97□□□□□ -1.13
MDC1-205ENST00000425072 TMEM37Q8WXS4 190 aa7.97□□□□□ -1.13
MDC1-205ENST00000425072 RAB24Q969Q5 203 aa7.97□□□□□ -1.13
MDC1-205ENST00000425072 NARS2Q96I59 477 aaKnown RBP7.97□□□□□ -1.13
MDC1-205ENST00000425072 VSIRQ9H7M9 311 aa7.97□□□□□ -1.13
MDC1-205ENST00000425072 RABAC1Q9UI14 185 aa7.97□□□□□ -1.13
MDC1-205ENST00000425072 FUT9Q9Y231 359 aa7.97□□□□□ -1.13
MDC1-205ENST00000425072 ANK3Q12955 4377 aaKnown RBP7.97□□□□□ -1.13
MDC1-205ENST00000425072 A0A1W2PS18 150 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 PPP5D1E7EU14 171 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 I3L521 148 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 K7EMT4 169 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 CXorf1O96002 111 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 NMBP08949 121 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 PPT1P50897 306 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 TCTEX1D4Q5JR98 221 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 KHDC1LQ5JSQ8 128 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 PATE2Q6UY27 113 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 PQLC2Q6ZP29 291 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 LINC00305Q7Z4B0 112 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 OR1N2Q8NGR9 330 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 LYPD6BQ8NI32 183 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 RCC1LQ96I51 464 aaKnown RBP7.96□□□□□ -1.14
MDC1-205ENST00000425072 OR5B12Q96R08 314 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 METTL26Q96S19 204 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 PBDC1Q9BVG4 233 aa7.96□□□□□ -1.14
MDC1-205ENST00000425072 ZNF320A2RRD8 509 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 LINC01619G3V211 115 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 STAG3L2P0CL84 134 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 STAG3L3P0CL85 134 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 CD28P10747 220 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 BMI1P35226 326 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 PSMB3P49720 205 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 FHITP49789 147 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 PMS2P11Q13670 270 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 GCSAMLQ5JQS6 135 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 LCN15Q6UWW0 184 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 KLHL30-AS1Q8NEE0 82 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 GRAMD2BQ96HH9 432 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 SLC25A39Q9BZJ4 359 aaPredicted RBP7.95□□□□□ -1.14
MDC1-205ENST00000425072 HRH4Q9H3N8 390 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 SEPSECSQ9HD40 501 aaKnown RBP7.95□□□□□ -1.14
MDC1-205ENST00000425072 MED9Q9NWA0 146 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 DOK5Q9P104 306 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 UFC1Q9Y3C8 167 aa7.95□□□□□ -1.14
MDC1-205ENST00000425072 IGHV3-35A0A0C4DH35 117 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 MAP1LC3B2A6NCE7 125 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 LGALS9O00182 355 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 TAGLN2P37802 199 aaKnown RBP7.94□□□□□ -1.14
MDC1-205ENST00000425072 KHDC3LQ587J8 217 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 C1orf194Q5T5A4 169 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 BPIFA4PQ86YQ2 179 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.94□□□□□ -1.14
MDC1-205ENST00000425072 OR11H1Q8NG94 326 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 MARC2Q969Z3 335 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 GPR82Q96P67 336 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 CITED2Q99967 270 aaPredicted RBP7.94□□□□□ -1.14
MDC1-205ENST00000425072 SHANK2-AS3Q9BTD1 123 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 C20orf24Q9BUV8 137 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 MAP1LC3BQ9GZQ8 125 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 TMEM231Q9H6L2 316 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 TMEM167BQ9NRX6 74 aa7.94□□□□□ -1.14
MDC1-205ENST00000425072 LINC00862A6NCI5 91 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 ZNF98A6NK75 572 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 IFNA1P01562 189 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 TRBV12-3P01733 135 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 CRYBB3P26998 211 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 SRSF2Q01130 221 aaKnown RBP7.93□□□□□ -1.14
MDC1-205ENST00000425072 KLF5Q13887 457 aaPredicted RBP7.93□□□□□ -1.14
MDC1-205ENST00000425072 USF2Q15853 346 aaPredicted RBP7.93□□□□□ -1.14
MDC1-205ENST00000425072 IL34Q6ZMJ4 242 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 MIR17HGQ75NE6 70 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 NDUFA11Q86Y39 141 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 OR8I2Q8N0Y5 310 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 OR51M1Q9H341 326 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 SMDT1Q9H4I9 107 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 SLC25A22Q9H936 323 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 PEMTQ9UBM1 199 aa7.93□□□□□ -1.14
MDC1-205ENST00000425072 IGHV4OR15-8A0A075B7B6 117 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 A0A087WW49 117 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 RAB19A4D1S5 217 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 CCL24O00175 119 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 CD5P06127 495 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 RPL7P18124 248 aaKnown RBP7.92□□□□□ -1.14
MDC1-205ENST00000425072 HOXD3P31249 432 aaPredicted RBP7.92□□□□□ -1.14
MDC1-205ENST00000425072 MYCNOSP40205 109 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 ZNF726P1Q15940 193 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 REC114Q7Z4M0 266 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 C1QL4Q86Z23 238 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 C11orf44Q8N8P7 122 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 PCNPQ8WW12 178 aaKnown RBP7.92□□□□□ -1.14
MDC1-205ENST00000425072 TMEM190Q8WZ59 177 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 TMEM158Q8WZ71 300 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 UHRF2Q96PU4 802 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 TXNDC17Q9BRA2 123 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
MDC1-205ENST00000425072 NKX6-2Q9C056 277 aaPredicted RBP7.92□□□□□ -1.14
MDC1-205ENST00000425072 DAZ1Q9NQZ3 744 aaKnown RBP7.92□□□□□ -1.14
MDC1-205ENST00000425072 TMEM14CQ9P0S9 112 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms