RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CATR1Q13166 79 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 MIAQ16674 131 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 Q56UQ5 140 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 NOXRED1Q6NXP6 359 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 FOXI2Q6ZQN5 318 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 C7orf65Q6ZTY9 151 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 SVBPQ8N300 66 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 MIR7-3HGQ8N6C7 128 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 CNEP1R1Q8N9A8 125 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 UPK3BQ9BT76 320 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 NOP16Q9Y3C1 178 aaKnown RBP2.5□□□□□ -2.01
SF3B1-205ENST00000424674 HSPE1-MOB4S4R3N1 261 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 ERICH3Q5RHP9 1530 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 GPATCH8Q9UKJ3 1502 aaKnown RBP2.5□□□□□ -2.01
SF3B1-205ENST00000424674 CEP162Q5TB80 1403 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 YEATS2Q9ULM3 1422 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 SYNJ1O43426 1573 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 PLXND1Q9Y4D7 1925 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 A8MWP4 228 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 C3orf84H3BNL1 204 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 RER1O15258 196 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 SYNGR2O43760 224 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 IGKV1-16P04430 117 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 CD2P06729 351 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 TRGC1P0CF51 173 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 ZNF883P0CG24 379 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 IFITM1P13164 125 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 ZNF90Q03938 601 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 MRPL54Q6P161 138 aaKnown RBP2.49□□□□□ -2.01
SF3B1-205ENST00000424674 LYZL2Q7Z4W2 148 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 KRTAP7-1Q8IUC3 87 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 SIGLECL1Q8N7X8 197 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.49□□□□□ -2.01
SF3B1-205ENST00000424674 CLDND2Q8NHS1 167 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 LCN9Q8WX39 176 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 DIRC1Q969H9 104 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 RAB37Q96AX2 223 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 AGPAT4-IT1Q9H0P7 198 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 SLC35B3Q9H1N7 401 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 SMDT1Q9H4I9 107 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 ZNF222Q9UK12 451 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 CHCHD2Q9Y6H1 151 aaPredicted RBP2.49□□□□□ -2.01
SF3B1-205ENST00000424674 ARHGAP35Q9NRY4 1499 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 CEP164Q9UPV0 1460 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 TSPOAP1O95153 1857 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 MYH11P35749 1972 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 KTN1Q86UP2 1357 aaKnown RBP2.49□□□□□ -2.01
SF3B1-205ENST00000424674 ANKRD36BQ8N2N9 1353 aa2.49□□□□□ -2.01
SF3B1-205ENST00000424674 ADGRL2O95490 1459 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 A0A0J9YW62 118 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 A0A0J9YWU9 116 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 TCRBV3S1A0A5B6 114 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 H3BMM0 161 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 APOC4-APOC2K7ER74 178 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 K7ERJ3 54 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 GEMIN2O14893 280 aaKnown RBP2.48□□□□□ -2.01
SF3B1-205ENST00000424674 LECT2O14960 151 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 CREBL2O60519 120 aaPredicted RBP2.48□□□□□ -2.01
SF3B1-205ENST00000424674 LY6HO94772 140 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 IGKV1D-33P01593 117 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 IGKV1-33P01594 117 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 APOC2P02655 101 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 TRGV3P03979 118 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 MSMBP08118 114 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 CCL5P13501 91 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 TPT1P13693 172 aaKnown RBP2.48□□□□□ -2.01
SF3B1-205ENST00000424674 ZNF19P17023 458 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 NFYAP23511 347 aaPredicted RBP2.48□□□□□ -2.01
SF3B1-205ENST00000424674 MPV17P39210 176 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 SNRPD3P62318 126 aaKnown RBP2.48□□□□□ -2.01
SF3B1-205ENST00000424674 IL17AQ16552 155 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 C9orf129Q5T035 196 aaKnown RBP2.48□□□□□ -2.01
SF3B1-205ENST00000424674 C6orf52Q5T4I8 152 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 ZFP2Q6ZN57 461 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 WFDC11Q8NEX6 87 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 RBPMSQ93062 196 aaKnown RBP2.48□□□□□ -2.01
SF3B1-205ENST00000424674 UBE2WQ96B02 151 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 RBMXL1Q96E39 390 aaKnown RBP2.48□□□□□ -2.01
SF3B1-205ENST00000424674 SEC11CQ9BY50 192 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 DPY30Q9C005 99 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 C16orf95Q9H693 158 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 ZNF355PQ9NSJ1 428 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 AP4S1Q9Y587 144 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 DNAJC15Q9Y5T4 150 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 PTPRTO14522 1441 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 RGS12O14924 1447 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 MYH7P12883 1935 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 CHD4Q14839 1912 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 MED1Q15648 1581 aaPredicted RBP2.48□□□□□ -2.01
SF3B1-205ENST00000424674 GON4LQ3T8J9 2241 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 FER1L6Q2WGJ9 1857 aa2.48□□□□□ -2.01
SF3B1-205ENST00000424674 OTOFQ9HC10 1997 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 AHDC1Q5TGY3 1603 aaPredicted RBP2.47□□□□□ -2.01
SF3B1-205ENST00000424674 TICRRQ7Z2Z1 1910 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.47□□□□□ -2.01
SF3B1-205ENST00000424674 IGKV3D-15A0A087WSY6 115 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 IGHV3-73A0A0B4J1V6 119 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 H3BT86 120 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 RBP4P02753 201 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms