RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
COL20A1-203ENST00000422202 ACACAQ13085 2346 aa11.25□□□□□ -0.61
COL20A1-203ENST00000422202 PMS2P5A8MQ11 134 aa11.25□□□□□ -0.61
COL20A1-203ENST00000422202 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
COL20A1-203ENST00000422202 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
COL20A1-203ENST00000422202 DEPPQ9NTK1 212 aa11.25□□□□□ -0.61
COL20A1-203ENST00000422202 SPRR3Q9UBC9 169 aa11.25□□□□□ -0.61
COL20A1-203ENST00000422202 ZNF708P17019 499 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 NRN1Q9NPD7 142 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 TNCP24821 2201 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 J3QW42 95 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 MGST2Q99735 147 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 TRAV9-2A0A087WT02 112 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 SSBP2P81877 361 aaPredicted RBP11.24□□□□□ -0.61
COL20A1-203ENST00000422202 WFDC6Q9BQY6 131 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 C1QTNF5Q9BXJ0 243 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 OVOL2Q9BRP0 275 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 hADV29S1A0JD25 119 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 TCRAP04437 139 aa11.24□□□□□ -0.61
COL20A1-203ENST00000422202 SERF1AO75920 110 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 LINC01356Q8N9X3 169 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 SLC25A39Q9BZJ4 359 aaPredicted RBP11.23□□□□□ -0.61
COL20A1-203ENST00000422202 J3QKU1 62 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 ZNF497Q6ZNH5 498 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 ANAPC1Q9H1A4 1944 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 ADAMTS9Q9P2N4 1935 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 IGHV2-26A0A0B4J1V2 119 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 NCR2O95944 276 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 CSTL1Q9H114 145 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 SHANK1Q9Y566 2161 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 IFI27L1Q96BM0 104 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 SPXQ9BT56 116 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 SCRT1Q9BWW7 348 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 DKK4Q9UBT3 224 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 UCP1P25874 307 aa11.23□□□□□ -0.61
COL20A1-203ENST00000422202 IGHV1-18A0A0C4DH31 117 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 E9PLN8 166 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 TMEM144Q7Z5S9 345 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 PPP1R3EQ9H7J1 279 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 ZNF672Q499Z4 452 aaPredicted RBP11.22□□□□□ -0.61
COL20A1-203ENST00000422202 PQLC2LA1A4F0 135 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 B4DSR2 109 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 PPBPP02775 128 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 FNDC1Q4ZHG4 1894 aaPredicted RBP11.22□□□□□ -0.61
COL20A1-203ENST00000422202 A0A087WWL8 130 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 SP5Q6BEB4 398 aaPredicted RBP11.22□□□□□ -0.61
COL20A1-203ENST00000422202 MAPK1IP1LQ8NDC0 245 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 RBM38Q9H0Z9 239 aaKnown RBP11.22□□□□□ -0.61
COL20A1-203ENST00000422202 CD5P06127 495 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 TM2D1Q9BX74 207 aa11.22□□□□□ -0.61
COL20A1-203ENST00000422202 MED12LQ86YW9 2145 aa11.21□□□□□ -0.61
COL20A1-203ENST00000422202 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.61
COL20A1-203ENST00000422202 TRAV5A0A0B4J249 113 aa11.21□□□□□ -0.61
COL20A1-203ENST00000422202 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
COL20A1-203ENST00000422202 DMRTC2Q8IXT2 367 aaPredicted RBP11.21□□□□□ -0.61
COL20A1-203ENST00000422202 C4orf51C9J302 202 aa11.21□□□□□ -0.61
COL20A1-203ENST00000422202 TMEM200BQ69YZ2 307 aa11.21□□□□□ -0.61
COL20A1-203ENST00000422202 TMEM14DPA8MWL7 114 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 PSPNO60542 156 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 PRIMA1Q86XR5 153 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 MDS2Q8NDY4 140 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 NPDC1Q9NQX5 325 aaPredicted RBP11.21□□□□□ -0.62
COL20A1-203ENST00000422202 MSRB2Q9Y3D2 182 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 D6R8Y8 96 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 C20orf204Q6ZNR8 217 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 NR2C2APQ86WQ0 139 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 PLEKHB2Q96CS7 222 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 ZNF837Q96EG3 531 aaPredicted RBP11.21□□□□□ -0.62
COL20A1-203ENST00000422202 VWA8A3KMH1 1905 aa11.21□□□□□ -0.62
COL20A1-203ENST00000422202 TNFSF13O75888 250 aa11.2□□□□□ -0.62
COL20A1-203ENST00000422202 GZMMP51124 257 aa11.2□□□□□ -0.62
COL20A1-203ENST00000422202 IGHV3-16A0A0C4DH30 117 aa11.2□□□□□ -0.62
COL20A1-203ENST00000422202 NDUFS8O00217 210 aa11.2□□□□□ -0.62
COL20A1-203ENST00000422202 CHCHD1Q96BP2 118 aaKnown RBP11.2□□□□□ -0.62
COL20A1-203ENST00000422202 CCL20P78556 96 aa11.2□□□□□ -0.62
COL20A1-203ENST00000422202 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
COL20A1-203ENST00000422202 GSN-AS1Q9NRJ2 163 aa11.2□□□□□ -0.62
COL20A1-203ENST00000422202 PLAC1Q9HBJ0 212 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 VCYO14598 125 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 EFNA4P52798 201 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 LCN12Q6JVE5 192 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 ZNF883P0CG24 379 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 TRBV5-3A0A0A0MS03 114 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 RNF223E7ERA6 249 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 EFNB3Q15768 340 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 MBD3L4A6NDZ8 208 aaPredicted RBP11.19□□□□□ -0.62
COL20A1-203ENST00000422202 MBD3L3A6NE82 208 aaPredicted RBP11.19□□□□□ -0.62
COL20A1-203ENST00000422202 MBD3L5A6NJ08 208 aaPredicted RBP11.19□□□□□ -0.62
COL20A1-203ENST00000422202 PRR31Q5SQ13 230 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 MBD3L2Q8NHZ7 208 aaPredicted RBP11.19□□□□□ -0.62
COL20A1-203ENST00000422202 Q96MF0 132 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 SMIM10L1P0DMW3 83 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 APOC4P55056 127 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 RPL23P62829 140 aaKnown RBP11.19□□□□□ -0.62
COL20A1-203ENST00000422202 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 SMIM10Q96HG1 83 aa11.19□□□□□ -0.62
COL20A1-203ENST00000422202 KIAA1549Q9HCM3 1950 aa11.18□□□□□ -0.62
COL20A1-203ENST00000422202 IGKV1D-43A0A0B4J1Z2 117 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms