RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 HEYLQ9NQ87 328 aaPredicted RBP6.4□□□□□ -1.38
SIK3-203ENST00000415541 ZNF355PQ9NSJ1 428 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 MYO18BQ8IUG5 2567 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 IGKV1-6A0A0C4DH72 117 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 NRN1LQ496H8 165 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 FAM120AOSQ5T036 256 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 PCSK4Q6UW60 755 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 LINC00596Q86U02 117 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 NDFIP1Q9BT67 221 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 C1QTNF5Q9BXJ0 243 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 CXXC4Q9H2H0 198 aa6.4□□□□□ -1.38
SIK3-203ENST00000415541 CREBBPQ92793 2442 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 GAGE12JA6NER3 117 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 GAGE7O76087 117 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 GAGE12FP0CL80 117 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 GAGE12GP0CL81 117 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 GAGE12IP0CL82 117 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 ERVK11-1P61568 191 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 GAGE4Q13068 117 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 Q6ZPA2 131 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 SH2D6Q7Z4S9 175 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 GTSF1Q8WW33 167 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 MBD6Q96DN6 1003 aa6.4□□□□□ -1.39
SIK3-203ENST00000415541 TRBV6-6A0A0A6YYG2 114 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 A8MWL6 223 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 RRHO14718 337 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 NMUP48645 174 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 TCTAP57738 103 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 ZNF816Q0VGE8 651 aaPredicted RBP6.39□□□□□ -1.39
SIK3-203ENST00000415541 LY6DQ14210 128 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 EFNB3Q15768 340 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 TMEM42Q69YG0 159 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 SLC35E4Q6ICL7 350 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 BCL6BQ8N143 479 aaPredicted RBP6.39□□□□□ -1.39
SIK3-203ENST00000415541 SSMEM1Q8WWF3 244 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 ARPC1AQ92747 370 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 SNRNP40Q96DI7 357 aaKnown RBP6.39□□□□□ -1.39
SIK3-203ENST00000415541 AP5S1Q9NUS5 200 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 IDI2-AS1Q9NZ38 188 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 HIGD1CA8MV81 97 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 WNT9BO14905 357 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 MPV17P39210 176 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 Q8IYB0 196 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 MCRIP2Q9BUT9 160 aaKnown RBP6.39□□□□□ -1.39
SIK3-203ENST00000415541 C1QTNF4Q9BXJ3 329 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 PTPN13Q12923 2485 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 TMEM262E9PQX1 116 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 RSPO1Q2MKA7 263 aaPredicted RBP6.39□□□□□ -1.39
SIK3-203ENST00000415541 PRR30Q53SZ7 412 aaPredicted RBP6.39□□□□□ -1.39
SIK3-203ENST00000415541 TEPPQ6URK8 271 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 LCNL1Q6ZST4 164 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 ATP6V0E2Q8NHE4 81 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 PRSS3P2Q8NHM4 247 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 ZDHHC16Q969W1 377 aa6.39□□□□□ -1.39
SIK3-203ENST00000415541 TMEM30CPA0ZSE6 113 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 NPIPB11E5RHQ5 1161 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 TREML4Q6UXN2 200 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 DAZAP1Q96EP5 407 aaKnown RBP6.38□□□□□ -1.39
SIK3-203ENST00000415541 MBNL3Q9NUK0 354 aaKnown RBP6.38□□□□□ -1.39
SIK3-203ENST00000415541 SS18L1O75177 396 aaPredicted RBP6.38□□□□□ -1.39
SIK3-203ENST00000415541 TTC32Q5I0X7 151 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 Q6ZS92 163 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 ZCCHC24Q8N2G6 241 aaKnown RBP6.38□□□□□ -1.39
SIK3-203ENST00000415541 DRAM1Q8N682 238 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 ITLN1Q8WWA0 313 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 ZNF503-AS2A6NEH8 195 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 TFF1P04155 84 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 CT45A10P0DMU9 189 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 GATA3P23771 443 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 VDAC2P45880 294 aaPredicted RBP6.38□□□□□ -1.39
SIK3-203ENST00000415541 FAM201AQ5SY85 155 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 Q6ZUT4 128 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 RBMXL3Q8N7X1 1067 aaKnown RBP6.38□□□□□ -1.39
SIK3-203ENST00000415541 OR8A1Q8NGG7 326 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 FAM57AQ8TBR7 257 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 MGST2Q99735 147 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 ENY2Q9NPA8 101 aa6.38□□□□□ -1.39
SIK3-203ENST00000415541 NHP2Q9NX24 153 aaKnown RBP6.38□□□□□ -1.39
SIK3-203ENST00000415541 F11RQ9Y624 299 aaKnown RBP6.38□□□□□ -1.39
SIK3-203ENST00000415541 DMDP11532 3685 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 CSPG4Q6UVK1 2322 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 C15orf62A8K5M9 175 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 ACTL6BO94805 426 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 CSN3P07498 182 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 CD3EP07766 207 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 FGF6P10767 208 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 TNFRSF1AP19438 455 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 ERVK-16P61578 105 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 SPINK9Q5DT21 86 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 FOXL2NBQ6ZUU3 175 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 LINC01560Q8TB33 94 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 TMUB1Q9BVT8 246 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 VWC2LB2RUY7 222 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 FOXI1Q12951 378 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 LGALS9BQ3B8N2 356 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 LGALS9CQ6DKI2 356 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 WDR31Q8NA23 367 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.37□□□□□ -1.39
SIK3-203ENST00000415541 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
SIK3-203ENST00000415541 C20orf78Q9BR46 151 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms