RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 U3KQE9 123 aa11.31□□□□□ -0.6
SYNGR1-206ENST00000415332 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 IGKV1-17P01599 117 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 ZNF705DP0CH99 300 aaPredicted RBP11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 ZNF705BP0CI00 300 aaPredicted RBP11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 HTN3P15516 51 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 FXYD7P58549 80 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 DEFB1P60022 68 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 FGL1Q08830 312 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 Q8N1X5 172 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 OR2T35Q8NGX2 323 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 GLMPQ8WWB7 406 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 FAM210BQ96KR6 192 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 NEU1Q99519 415 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 RTBDNQ9BSG5 229 aaPredicted RBP11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 C1QTNF4Q9BXJ3 329 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 DKK2Q9UBU2 259 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 KCNIP3Q9Y2W7 256 aa11.3□□□□□ -0.6
SYNGR1-206ENST00000415332 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
SYNGR1-206ENST00000415332 SNCAP37840 140 aa11.29□□□□□ -0.6
SYNGR1-206ENST00000415332 NKX2-5P52952 324 aaPredicted RBP11.29□□□□□ -0.6
SYNGR1-206ENST00000415332 CYCSP99999 105 aaKnown RBP11.29□□□□□ -0.6
SYNGR1-206ENST00000415332 FAM222AQ5U5X8 452 aa11.29□□□□□ -0.6
SYNGR1-206ENST00000415332 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
SYNGR1-206ENST00000415332 NIPSNAP3BQ9BS92 247 aa11.29□□□□□ -0.6
SYNGR1-206ENST00000415332 FAM212BQ9NTI7 297 aaPredicted RBP11.29□□□□□ -0.6
SYNGR1-206ENST00000415332 TEX13DA0A0J9YY54 714 aaPredicted RBP11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 CRYM-AS1A6NIL9 109 aa11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 RND3P61587 244 aa11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 NUTF2P61970 127 aaKnown RBP11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 SRPXP78539 464 aa11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 GDF5OSQ5U4N7 250 aa11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 TMEM88Q6PEY1 159 aa11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 ZBTB8BQ8NAP8 495 aaPredicted RBP11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 OR4X1Q8NH49 305 aa11.28□□□□□ -0.6
SYNGR1-206ENST00000415332 INS-IGF2F8WCM5 200 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 B3GALNT1O75752 331 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 IGKV1-5P01602 117 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 IGKV3-20P01619 116 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 OPRK1P41145 380 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 PIGPP57054 158 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 GSG1LQ6UXU4 331 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 SLC35G3Q8N808 338 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 NARS2Q96I59 477 aaKnown RBP11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 PDCD10Q9BUL8 212 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 NAA60Q9H7X0 242 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 SCRT2Q9NQ03 307 aa11.27□□□□□ -0.61
SYNGR1-206ENST00000415332 TMEM189A5PLL7 270 aa11.26□□□□□ -0.61
SYNGR1-206ENST00000415332 SMIM9A6NGZ8 99 aa11.26□□□□□ -0.61
SYNGR1-206ENST00000415332 P0C879 139 aa11.26□□□□□ -0.61
SYNGR1-206ENST00000415332 HLA-DRB4P13762 266 aa11.26□□□□□ -0.61
SYNGR1-206ENST00000415332 PI3P19957 117 aa11.26□□□□□ -0.61
SYNGR1-206ENST00000415332 H2BFSP57053 126 aa11.26□□□□□ -0.61
SYNGR1-206ENST00000415332 SUPT4H1P63272 117 aaKnown RBP11.26□□□□□ -0.61
SYNGR1-206ENST00000415332 RFNGQ9Y644 331 aa11.26□□□□□ -0.61
SYNGR1-206ENST00000415332 HLA-DRB4X5D2U9 266 aa11.26□□□□□ -0.61
SYNGR1-206ENST00000415332 HMSDA8MTL9 139 aa11.25□□□□□ -0.61
SYNGR1-206ENST00000415332 SMLR1H3BR10 107 aa11.25□□□□□ -0.61
SYNGR1-206ENST00000415332 CORTO00230 105 aa11.25□□□□□ -0.61
SYNGR1-206ENST00000415332 SNRPD3P62318 126 aaKnown RBP11.25□□□□□ -0.61
SYNGR1-206ENST00000415332 USF2Q15853 346 aaPredicted RBP11.25□□□□□ -0.61
SYNGR1-206ENST00000415332 NMES1Q9C002 83 aa11.25□□□□□ -0.61
SYNGR1-206ENST00000415332 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
SYNGR1-206ENST00000415332 PAIP2BQ9ULR5 123 aaKnown RBP11.25□□□□□ -0.61
SYNGR1-206ENST00000415332 C5orf51A6NDU8 294 aa11.24□□□□□ -0.61
SYNGR1-206ENST00000415332 IGLC1P0CG04 106 aa11.24□□□□□ -0.61
SYNGR1-206ENST00000415332 AP2S1P53680 142 aaPredicted RBP11.24□□□□□ -0.61
SYNGR1-206ENST00000415332 SUB1P53999 127 aaKnown RBP eCLIP11.24□□□□□ -0.61
SYNGR1-206ENST00000415332 C9orf62Q8N4C0 152 aa11.24□□□□□ -0.61
SYNGR1-206ENST00000415332 HSPB11Q9Y547 144 aa11.24□□□□□ -0.61
SYNGR1-206ENST00000415332 FAM25EA8MYX2 175 aa11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 SIX6O95475 246 aa11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 PET100P0DJ07 73 aa11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 HOXA1P49639 335 aaPredicted RBP11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 BSXQ3C1V8 233 aa11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 LGI3Q8N145 548 aa11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 C6orf223Q8N319 242 aa11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 LRTM2Q8N967 370 aa11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 ZNF709Q8N972 641 aa11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 SEPSECSQ9HD40 501 aaKnown RBP11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
SYNGR1-206ENST00000415332 TRAV30A0A087WSZ9 112 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 A0A0G2JRQ6 117 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 NBDYA0A0U1RRE5 68 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 DUXBA0A1W2PPF3 345 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 RGS13O14921 159 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 BUB3O43684 328 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 SLC25A4P12235 298 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 NKX2-1P43699 371 aaPredicted RBP11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 PRSS54Q6PEW0 395 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 SIGLEC15Q6ZMC9 328 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 C1orf158Q8N1D5 194 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 Q8WTZ3 238 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 C2orf50Q96LR7 162 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 TP53RKQ96S44 253 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 SLC35B3Q9H1N7 401 aa11.22□□□□□ -0.61
SYNGR1-206ENST00000415332 TMED3Q9Y3Q3 217 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms