RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ERVH48-1M5A8F1 160 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 KLF5Q13887 457 aaPredicted RBP15.22■□□□□ 0.03
SHANK3-202ENST00000414786 PPP1R3EQ9H7J1 279 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 SPTBN1Q01082 2364 aaKnown RBP15.22■□□□□ 0.03
SHANK3-202ENST00000414786 RPL23P62829 140 aaKnown RBP15.22■□□□□ 0.03
SHANK3-202ENST00000414786 C5orf24Q7Z6I8 188 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 SAMD5Q5TGI4 173 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 LYZL1Q6UWQ5 148 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 TRBV5-7A0A0A0MS05 114 aa15.21■□□□□ 0.03
SHANK3-202ENST00000414786 C15orf61A6NNL5 157 aa15.21■□□□□ 0.03
SHANK3-202ENST00000414786 A0A0G2JNJ9 132 aa15.21■□□□□ 0.03
SHANK3-202ENST00000414786 OVOL3O00110 214 aa15.21■□□□□ 0.03
SHANK3-202ENST00000414786 LINC00205P59089 165 aa15.21■□□□□ 0.03
SHANK3-202ENST00000414786 Q9UFV3 132 aa15.21■□□□□ 0.03
SHANK3-202ENST00000414786 E9PLN8 166 aa15.21■□□□□ 0.03
SHANK3-202ENST00000414786 HAMPP81172 84 aa15.21■□□□□ 0.03
SHANK3-202ENST00000414786 RNASE13Q5GAN3 156 aaKnown RBP15.21■□□□□ 0.03
SHANK3-202ENST00000414786 E9PQ18 207 aa15.21■□□□□ 0.02
SHANK3-202ENST00000414786 FGFBP3Q8TAT2 258 aa15.21■□□□□ 0.02
SHANK3-202ENST00000414786 ZNF479Q96JC4 524 aa15.21■□□□□ 0.02
SHANK3-202ENST00000414786 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.2■□□□□ 0.02
SHANK3-202ENST00000414786 ZNF138P52744 262 aa15.2■□□□□ 0.02
SHANK3-202ENST00000414786 IFI27L1Q96BM0 104 aa15.2■□□□□ 0.02
SHANK3-202ENST00000414786 DSCR9P59020 149 aa15.2■□□□□ 0.02
SHANK3-202ENST00000414786 GTSF1LQ9H1H1 148 aa15.2■□□□□ 0.02
SHANK3-202ENST00000414786 PRDM13Q9H4Q3 707 aa15.2■□□□□ 0.02
SHANK3-202ENST00000414786 RPL18AQ02543 176 aaKnown RBP15.2■□□□□ 0.02
SHANK3-202ENST00000414786 A0A1W2PR77 199 aa15.2■□□□□ 0.02
SHANK3-202ENST00000414786 THADAQ6YHU6 1953 aa15.2■□□□□ 0.02
SHANK3-202ENST00000414786 SLC25A16P16260 332 aa15.19■□□□□ 0.02
SHANK3-202ENST00000414786 C1orf100Q5SVJ3 147 aa15.19■□□□□ 0.02
SHANK3-202ENST00000414786 RASL11AQ6T310 242 aa15.19■□□□□ 0.02
SHANK3-202ENST00000414786 IGHV1-3A0A0C4DH29 117 aa15.19■□□□□ 0.02
SHANK3-202ENST00000414786 UBE2E1P51965 193 aa15.19■□□□□ 0.02
SHANK3-202ENST00000414786 RHPN1-AS1Q9BWJ2 59 aa15.19■□□□□ 0.02
SHANK3-202ENST00000414786 IGKV1-39P01597 117 aa15.19■□□□□ 0.02
SHANK3-202ENST00000414786 IGKV1D-39P04432 117 aa15.19■□□□□ 0.02
SHANK3-202ENST00000414786 FOXG1P55316 489 aaPredicted RBP15.19■□□□□ 0.02
SHANK3-202ENST00000414786 ZNRD1Q9P1U0 126 aa15.19■□□□□ 0.02
SHANK3-202ENST00000414786 hDV102S1A0JD36 115 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 SH2D1AO60880 128 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 Q6ZQT7 251 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 TMEM238C9JI98 176 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 J3QW42 95 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 AZU1P20160 251 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 LYPD2Q6UXB3 125 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 TMEM14DPA8MWL7 114 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 DTX1Q86Y01 620 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 VSIRQ9H7M9 311 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 SCRT2Q9NQ03 307 aa15.18■□□□□ 0.02
SHANK3-202ENST00000414786 MMP23AO75900 390 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 ANGP03950 147 aaKnown RBP15.17■□□□□ 0.02
SHANK3-202ENST00000414786 SAA4P35542 130 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 TCTEX1D4Q5JR98 221 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 MYO7BQ6PIF6 2116 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 PRSS29PA6NIE9 313 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 GZMMP51124 257 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 FREM3P0C091 2139 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 LCN12Q6JVE5 192 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 RSPO3Q9BXY4 272 aaPredicted RBP15.17■□□□□ 0.02
SHANK3-202ENST00000414786 TRAV3A0A0B4J244 114 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 OCC1Q8TAD7 63 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 C1QTNF5Q9BXJ0 243 aa15.17■□□□□ 0.02
SHANK3-202ENST00000414786 Q6AWC8 147 aa15.16■□□□□ 0.02
SHANK3-202ENST00000414786 RTBDNQ9BSG5 229 aaPredicted RBP15.16■□□□□ 0.02
SHANK3-202ENST00000414786 SPTBN2O15020 2390 aa15.16■□□□□ 0.02
SHANK3-202ENST00000414786 SMIM2Q9BVW6 85 aa15.16■□□□□ 0.02
SHANK3-202ENST00000414786 LRRK1Q38SD2 2015 aa15.16■□□□□ 0.02
SHANK3-202ENST00000414786 AHDC1Q5TGY3 1603 aaPredicted RBP15.16■□□□□ 0.02
SHANK3-202ENST00000414786 IGHMP01871 453 aa15.16■□□□□ 0.02
SHANK3-202ENST00000414786 TIMM21Q9BVV7 248 aa15.16■□□□□ 0.02
SHANK3-202ENST00000414786 EFNA2O43921 213 aa15.16■□□□□ 0.02
SHANK3-202ENST00000414786 ESM1Q9NQ30 184 aa15.16■□□□□ 0.02
SHANK3-202ENST00000414786 ZNF407Q9C0G0 2248 aa15.16■□□□□ 0.02
SHANK3-202ENST00000414786 CMC4P56277 68 aaPredicted RBP15.15■□□□□ 0.02
SHANK3-202ENST00000414786 EFNB3Q15768 340 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 SPOCK3Q9BQ16 436 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 SCN7AQ01118 1682 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 VWC2Q2TAL6 325 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 TNFRSF14Q92956 283 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 C1QTNF4Q9BXJ3 329 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 A0A087WV48 116 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 A0A087X0K7 114 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 IGHG3P01860 377 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 TINCRA0A1B0GVN0 87 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 IGHV1-8P0DP01 117 aa15.15■□□□□ 0.02
SHANK3-202ENST00000414786 FAM90A1Q86YD7 464 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 BAALCQ8WXS3 180 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 PQLC2LA1A4F0 135 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 TUBGCP6Q96RT7 1819 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 PHF3Q92576 2039 aaKnown RBP15.14■□□□□ 0.01
SHANK3-202ENST00000414786 YPEL1O60688 119 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 YPEL2Q96QA6 119 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 NACAE9PAV3 2078 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 RREB1Q92766 1687 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 TRAV9-2A0A087WT02 112 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 GAGE2BQ13066 116 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 ZFAND6Q6FIF0 208 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 SIGMAR1Q99720 223 aa15.14■□□□□ 0.01
SHANK3-202ENST00000414786 WBP1Q96G27 269 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms