RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 FAM223BA6NKX1 122 aa19.92■□□□□ 0.78
CPNE1-205ENST00000401607 GGTLC3B5MD39 225 aa19.92■□□□□ 0.78
CPNE1-205ENST00000401607 HOXA3O43365 443 aaPredicted RBP19.92■□□□□ 0.78
CPNE1-205ENST00000401607 SCGB2A1O75556 95 aa19.92■□□□□ 0.78
CPNE1-205ENST00000401607 BRI3O95415 125 aa19.92■□□□□ 0.78
CPNE1-205ENST00000401607 GP9P14770 177 aa19.92■□□□□ 0.78
CPNE1-205ENST00000401607 FAM223AQ8IWN6 122 aa19.92■□□□□ 0.78
CPNE1-205ENST00000401607 ZNF580Q9UK33 172 aa19.92■□□□□ 0.78
CPNE1-205ENST00000401607 UNC79Q9P2D8 2635 aa19.91■□□□□ 0.78
CPNE1-205ENST00000401607 H3BRN7 92 aa19.91■□□□□ 0.78
CPNE1-205ENST00000401607 NDUFB4O95168 129 aa19.91■□□□□ 0.78
CPNE1-205ENST00000401607 TRGV3P03979 118 aa19.91■□□□□ 0.78
CPNE1-205ENST00000401607 CLEC3BP05452 202 aa19.91■□□□□ 0.78
CPNE1-205ENST00000401607 SHANK2-AS3Q9BTD1 123 aa19.91■□□□□ 0.78
CPNE1-205ENST00000401607 DERL1Q9BUN8 251 aa19.91■□□□□ 0.78
CPNE1-205ENST00000401607 NAT8Q9UHE5 227 aa19.91■□□□□ 0.78
CPNE1-205ENST00000401607 H3BUA1 57 aa19.9■□□□□ 0.78
CPNE1-205ENST00000401607 CFHR3Q02985 330 aa19.9■□□□□ 0.78
CPNE1-205ENST00000401607 ATP5G2Q06055 141 aa19.9■□□□□ 0.78
CPNE1-205ENST00000401607 ZNF343Q6P1L6 599 aa19.9■□□□□ 0.78
CPNE1-205ENST00000401607 CLEC19AQ6UXS0 136 aa19.9■□□□□ 0.78
CPNE1-205ENST00000401607 C11orf52Q96A22 123 aa19.9■□□□□ 0.78
CPNE1-205ENST00000401607 TRBV7-1A0A0A6YYK4 115 aa19.9■□□□□ 0.78
CPNE1-205ENST00000401607 PNRC1Q12796 327 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-205ENST00000401607 TMEM95Q3KNT9 176 aa19.9■□□□□ 0.78
CPNE1-205ENST00000401607 SNRPCP09234 159 aaKnown RBP19.89■□□□□ 0.77
CPNE1-205ENST00000401607 TEX29Q8N6K0 151 aa19.89■□□□□ 0.77
CPNE1-205ENST00000401607 GAR1Q9NY12 217 aaKnown RBP19.89■□□□□ 0.77
CPNE1-205ENST00000401607 CD5LO43866 347 aa19.88■□□□□ 0.77
CPNE1-205ENST00000401607 TMEM241Q24JQ0 296 aa19.88■□□□□ 0.77
CPNE1-205ENST00000401607 AKAP9Q99996 3911 aa19.88■□□□□ 0.77
CPNE1-205ENST00000401607 IGLV1-40P01703 118 aa19.88■□□□□ 0.77
CPNE1-205ENST00000401607 TPPP2P59282 170 aa19.88■□□□□ 0.77
CPNE1-205ENST00000401607 ZNF600Q6ZNG1 722 aa19.88■□□□□ 0.77
CPNE1-205ENST00000401607 SIGLECL1Q8N7X8 197 aa19.88■□□□□ 0.77
CPNE1-205ENST00000401607 TMEM14CQ9P0S9 112 aa19.88■□□□□ 0.77
CPNE1-205ENST00000401607 TGOLN2O43493 480 aa19.87■□□□□ 0.77
CPNE1-205ENST00000401607 SUMO1P63165 101 aaKnown RBP19.87■□□□□ 0.77
CPNE1-205ENST00000401607 TEX15Q9BXT5 2789 aa19.87■□□□□ 0.77
CPNE1-205ENST00000401607 RPL23P62829 140 aaKnown RBP19.86■□□□□ 0.77
CPNE1-205ENST00000401607 ATP6V0BQ99437 205 aa19.86■□□□□ 0.77
CPNE1-205ENST00000401607 ELOVL1Q9BW60 279 aa19.86■□□□□ 0.77
CPNE1-205ENST00000401607 KLK15Q9H2R5 256 aa19.86■□□□□ 0.77
CPNE1-205ENST00000401607 SMCO4Q9NRQ5 59 aa19.86■□□□□ 0.77
CPNE1-205ENST00000401607 IGHV3-35A0A0C4DH35 117 aa19.85■□□□□ 0.77
CPNE1-205ENST00000401607 NBEAP1P0C6P0 100 aa19.85■□□□□ 0.77
CPNE1-205ENST00000401607 BLNKQ8WV28 456 aa19.85■□□□□ 0.77
CPNE1-205ENST00000401607 CCDC168Q8NDH2 2452 aa19.85■□□□□ 0.77
CPNE1-205ENST00000401607 ZNF98A6NK75 572 aa19.85■□□□□ 0.77
CPNE1-205ENST00000401607 CRYBB3P26998 211 aa19.85■□□□□ 0.77
CPNE1-205ENST00000401607 ZFAND3Q9H8U3 227 aa19.85■□□□□ 0.77
CPNE1-205ENST00000401607 ITPR2Q14571 2701 aa19.85■□□□□ 0.77
CPNE1-205ENST00000401607 B4DEV8 164 aa19.84■□□□□ 0.77
CPNE1-205ENST00000401607 PF4V1P10720 104 aa19.84■□□□□ 0.77
CPNE1-205ENST00000401607 MYCNOSP40205 109 aa19.84■□□□□ 0.77
CPNE1-205ENST00000401607 ADIRFQ15847 76 aa19.84■□□□□ 0.77
CPNE1-205ENST00000401607 TOMM20LQ6UXN7 152 aa19.84■□□□□ 0.77
CPNE1-205ENST00000401607 GNB4Q9HAV0 340 aa19.84■□□□□ 0.77
CPNE1-205ENST00000401607 TRBV20OR9-2A0A075B6H5 130 aa19.83■□□□□ 0.77
CPNE1-205ENST00000401607 A0A087WWC5 75 aa19.83■□□□□ 0.77
CPNE1-205ENST00000401607 MRPS12O15235 138 aaKnown RBP19.83■□□□□ 0.77
CPNE1-205ENST00000401607 ZNF329Q86UD4 541 aa19.83■□□□□ 0.77
CPNE1-205ENST00000401607 USMG5Q96IX5 58 aa19.83■□□□□ 0.77
CPNE1-205ENST00000401607 ZNF702PQ9H963 129 aa19.83■□□□□ 0.77
CPNE1-205ENST00000401607 TMA7Q9Y2S6 64 aaKnown RBP19.83■□□□□ 0.77
CPNE1-205ENST00000401607 PRSS22Q9GZN4 317 aa19.83■□□□□ 0.76
CPNE1-205ENST00000401607 ZNF586Q9NXT0 402 aa19.83■□□□□ 0.76
CPNE1-205ENST00000401607 PPP5D1E7EU14 171 aa19.82■□□□□ 0.76
CPNE1-205ENST00000401607 H3BTX0 84 aa19.82■□□□□ 0.76
CPNE1-205ENST00000401607 HIST1H1EP10412 219 aaKnown RBP19.82■□□□□ 0.76
CPNE1-205ENST00000401607 SRP14P37108 136 aaKnown RBP19.82■□□□□ 0.76
CPNE1-205ENST00000401607 RANP62826 216 aaKnown RBP19.82■□□□□ 0.76
CPNE1-205ENST00000401607 LCNL1Q6ZST4 164 aa19.82■□□□□ 0.76
CPNE1-205ENST00000401607 S100A7AQ86SG5 101 aa19.82■□□□□ 0.76
CPNE1-205ENST00000401607 BPIFA4PQ86YQ2 179 aa19.82■□□□□ 0.76
CPNE1-205ENST00000401607 C2CD4CQ8TF44 421 aa19.82■□□□□ 0.76
CPNE1-205ENST00000401607 YAE1D1Q9NRH1 226 aa19.82■□□□□ 0.76
CPNE1-205ENST00000401607 IGHV3OR16-8A0A075B7F1 116 aa19.81■□□□□ 0.76
CPNE1-205ENST00000401607 DUX5Q96PT3 197 aa19.81■□□□□ 0.76
CPNE1-205ENST00000401607 NPFFR1Q9GZQ6 430 aa19.81■□□□□ 0.76
CPNE1-205ENST00000401607 TUBA4BQ9H853 241 aa19.81■□□□□ 0.76
CPNE1-205ENST00000401607 RABAC1Q9UI14 185 aa19.81■□□□□ 0.76
CPNE1-205ENST00000401607 BMPR1BO00238 502 aa19.8■□□□□ 0.76
CPNE1-205ENST00000401607 IGLC2P0DOY2 106 aa19.8■□□□□ 0.76
CPNE1-205ENST00000401607 RPL35P42766 123 aaKnown RBP19.8■□□□□ 0.76
CPNE1-205ENST00000401607 RAB9AP51151 201 aa19.8■□□□□ 0.76
CPNE1-205ENST00000401607 ISOC2Q96AB3 205 aa19.8■□□□□ 0.76
CPNE1-205ENST00000401607 PGPEP1LA6NFU8 196 aa19.8■□□□□ 0.76
CPNE1-205ENST00000401607 TSPAN4O14817 238 aa19.8■□□□□ 0.76
CPNE1-205ENST00000401607 IGHG4P01861 327 aa19.8■□□□□ 0.76
CPNE1-205ENST00000401607 LINC01551Q86U37 167 aa19.8■□□□□ 0.76
CPNE1-205ENST00000401607 TRBV12-3P01733 135 aa19.79■□□□□ 0.76
CPNE1-205ENST00000401607 FLNAP21333 2647 aaKnown RBP19.79■□□□□ 0.76
CPNE1-205ENST00000401607 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.78■□□□□ 0.76
CPNE1-205ENST00000401607 PSMB8P28062 276 aa19.78■□□□□ 0.76
CPNE1-205ENST00000401607 RELQ04864 619 aaPredicted RBP19.78■□□□□ 0.76
CPNE1-205ENST00000401607 RNF212Q495C1 297 aa19.78■□□□□ 0.76
CPNE1-205ENST00000401607 C10orf99Q6UWK7 81 aa19.78■□□□□ 0.76
CPNE1-205ENST00000401607 TMEM86BQ8N661 226 aa19.78■□□□□ 0.76
CPNE1-205ENST00000401607 CLPSL1A2RUU4 121 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms