RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TEX38Q6PEX7 206 aa11.27□□□□□ -0.61
SCAF4-202ENST00000399804 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.61
SCAF4-202ENST00000399804 HOXA5P20719 270 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 ODF3L1Q8IXM7 274 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 SLC25A39Q9BZJ4 359 aaPredicted RBP11.26□□□□□ -0.61
SCAF4-202ENST00000399804 DSCAMO60469 2012 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 SMIM17P0DL12 118 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 AARDQ4LEZ3 155 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 TM4SF20Q53R12 229 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 LURAP1LQ8IV03 231 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 C8orf31Q8N9H6 132 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 ATG101Q9BSB4 218 aa11.26□□□□□ -0.61
SCAF4-202ENST00000399804 TRAV41A0A0B4J266 112 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST1H2BKO60814 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST1H2BJP06899 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST1H2BOP23527 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST1H2BBP33778 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST1H2BDP58876 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST1H2BCP62807 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST2H2BEQ16778 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.25□□□□□ -0.61
SCAF4-202ENST00000399804 TCF23Q7RTU1 214 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST1H2BHQ93079 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST1H2BNQ99877 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HIST1H2BMQ99879 126 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 PKD1L2Q7Z442 2459 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 M0QZK8 103 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 PAFAH1B2P68402 229 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 ARHGAP32A7KAX9 2087 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 NDUFS8O00217 210 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 HTN1P15515 57 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 LYPD6BQ8NI32 183 aa11.25□□□□□ -0.61
SCAF4-202ENST00000399804 MSMBP08118 114 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 EXOC3-AS1Q8N2X6 119 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 RITA1Q96K30 269 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 PRORYQ9H606 182 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 FNDC4Q9H6D8 234 aaPredicted RBP11.24□□□□□ -0.61
SCAF4-202ENST00000399804 VPS13AQ96RL7 3174 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 M0R2Z0 102 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 GGCTO75223 188 aaKnown RBP11.24□□□□□ -0.61
SCAF4-202ENST00000399804 SRIP30626 198 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 ID1P41134 155 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 CFAP54Q96N23 3096 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 C1QL4Q86Z23 238 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 NAV3Q8IVL0 2385 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
SCAF4-202ENST00000399804 C11orf1Q9H5F2 150 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 TMEM242Q9NWH2 141 aa11.24□□□□□ -0.61
SCAF4-202ENST00000399804 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.23□□□□□ -0.61
SCAF4-202ENST00000399804 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
SCAF4-202ENST00000399804 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 DYNLRB2Q8TF09 96 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 F5H697 171 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 CD99P14209 185 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 LINC00479Q96M42 142 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 ARL2-SNX15V9GYD0 113 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 TNRC6BQ9UPQ9 1833 aaKnown RBP11.23□□□□□ -0.61
SCAF4-202ENST00000399804 ABCA2Q9BZC7 2435 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 HAX1O00165 279 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 G0S2P27469 103 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 FMC1Q96HJ9 113 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 VAMP8Q9BV40 100 aa11.23□□□□□ -0.61
SCAF4-202ENST00000399804 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 SCGB2A2Q13296 93 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 SPANXN1Q5VSR9 72 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 TEX29Q8N6K0 151 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 SRSF8Q9BRL6 282 aaKnown RBP11.22□□□□□ -0.61
SCAF4-202ENST00000399804 TRBV24-1A0A075B6N3 115 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 TWIST1Q15672 202 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 DUX5Q96PT3 197 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 NEU1Q99519 415 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 CELSR3Q9NYQ7 3312 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 IGLC7A0M8Q6 106 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 G3V318 75 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 IGLV1-47P01700 117 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 SLC25A16P16260 332 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 C1orf229Q6ZS94 237 aaPredicted RBP11.22□□□□□ -0.61
SCAF4-202ENST00000399804 DTX2Q86UW9 622 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 TMEM208Q9BTX3 173 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 OSTCQ9NRP0 149 aa11.22□□□□□ -0.61
SCAF4-202ENST00000399804 IGHV1-69DA0A0B4J2H0 117 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 IGHV1-69P01742 117 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 DDTP30046 118 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 HSPB9Q9BQS6 159 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 HIGD1CA8MV81 97 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 ATP6V0E1O15342 81 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 NDUFB8O95169 186 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 C1orf122Q6ZSJ8 110 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 OR11H6Q8NGC7 330 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 OR4B1Q8NGF8 309 aa11.21□□□□□ -0.61
SCAF4-202ENST00000399804 MUC21A0A0G2JKD1 596 aa11.21□□□□□ -0.62
SCAF4-202ENST00000399804 MUC21A0A140T8X8 626 aa11.21□□□□□ -0.62
SCAF4-202ENST00000399804 P0C879 139 aa11.21□□□□□ -0.62
SCAF4-202ENST00000399804 FOXA3P55318 350 aaPredicted RBP11.21□□□□□ -0.62
SCAF4-202ENST00000399804 PRR20EP86478 221 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms