RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PFN1P07737 140 aaKnown RBP7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 SSC5DA1L4H1 1573 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 LY6EQ16553 131 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 PLXNA2O75051 1894 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 TMEM240Q5SV17 173 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 PSME4Q14997 1843 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 FBLN5Q9UBX5 448 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 LSM4Q9Y4Z0 139 aaKnown RBP7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 CACNA1AO00555 2505 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 PRR4Q16378 134 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 CENPVL3A0A0U1RRI6 287 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 OXLD1Q5BKU9 147 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 KLK13Q9UKR3 277 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 ARFGEF1Q9Y6D6 1849 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 C2CD3Q4AC94 2353 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 ZIC1Q15915 447 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 TRPM3Q9HCF6 1732 aaPredicted RBP7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 PRSS22Q9GZN4 317 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 RIMS1Q86UR5 1692 aaKnown RBP7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 RNASE2P10153 161 aaKnown RBP7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 DPM3Q9P2X0 92 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 HELZP42694 1942 aaKnown RBP7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 H0YGX0 51 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 LYL1P12980 280 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 CCL14Q16627 93 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 LINC00477Q96M19 166 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 C1orf220Q5T0J3 134 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 HCFC1R1Q9NWW0 138 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 RGPD2P0DJD1 1756 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 HERVK_113P63121 156 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 FAM236AA0A1B0GUQ0 79 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 FAM236BA0A1B0GV22 79 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 ETDCA0A1B0GVM5 59 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 ZG16O60844 167 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 RNASE7Q9H1E1 156 aaKnown RBP7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 CCL8P80075 99 aa7.18□□□□□ -1.26
CACNA1C-220ENST00000399655 SPSB3Q6PJ21 355 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 TOPAZ1Q8N9V7 1692 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 TJP1Q07157 1748 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 DDX60LQ5H9U9 1706 aaKnown RBP7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 VSIG8P0DPA2 414 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 PRB3Q04118 309 aaPredicted RBP7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 ZC2HC1BQ5TFG8 222 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 CSTL1Q9H114 145 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 DLEC1Q9Y238 1755 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 UBR3Q6ZT12 1888 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 MAVSQ7Z434 540 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 RNF114Q9Y508 228 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 IGLL5B9A064 214 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 HCRTO43612 131 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 FAM27BQ5VT28 67 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 CD200R1LQ6Q8B3 271 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 DKK4Q9UBT3 224 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 SCN7AQ01118 1682 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 A0A1W2PPM0 123 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 GFRA4Q9GZZ7 299 aa7.17□□□□□ -1.26
CACNA1C-220ENST00000399655 A0A1W2PR77 199 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 YPEL2Q96QA6 119 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 CCL3L1P16619 93 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 LYZL4Q96KX0 146 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 FGF11Q92914 225 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 GLMPQ8WWB7 406 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 RNF185Q96GF1 192 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 A0A0U1RQV1 116 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 TMEM14DPA8MWL7 114 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 ETV2O00321 342 aaPredicted RBP7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 CLEC19AQ6UXS0 136 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 VWA8A3KMH1 1905 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 CCL7P80098 99 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 ZNF329Q86UD4 541 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 CFHR4Q92496 578 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 MYEOVQ96EZ4 313 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 IGHV3-72A0A0B4J1Y9 119 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 TEX36Q5VZQ5 186 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 ZNF524Q96C55 264 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 IMMP1LQ96LU5 166 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 NEU4Q8WWR8 484 aaPredicted RBP7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 PLXNA3P51805 1871 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 ZNF138P52744 262 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 PSG8Q9UQ74 426 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 TINCRA0A1B0GVN0 87 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 PAX8Q06710 450 aa7.16□□□□□ -1.26
CACNA1C-220ENST00000399655 COL9A2Q14055 689 aaPredicted RBP7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 TRBV24-1A0A075B6N3 115 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 NANOS3P60323 173 aaKnown RBP7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 NBR2O15453 112 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 ZNF252P-AS1Q0IIN9 211 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 FRMPD3Q5JV73 1810 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 PRR33A8MZF0 331 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 I3L3M4 83 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 VEGFBP49765 207 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 C5P01031 1676 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 BUB3O43684 328 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 SERTAD4-AS1Q5TG53 156 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 PEAR1Q5VY43 1037 aaPredicted RBP7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 TRBV7-1A0A0A6YYK4 115 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 HERV-K104P63124 156 aa7.15□□□□□ -1.26
CACNA1C-220ENST00000399655 IGKV1D-33P01593 117 aa7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 IGKV1-33P01594 117 aa7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 CDKN1BP46527 198 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms