RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 RPL36AP83881 106 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 C1QL4Q86Z23 238 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 RPL36ALQ969Q0 106 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 MGST2Q99735 147 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 TFF1P04155 84 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 UBE2BP63146 152 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 ATP5L2Q7Z4Y8 100 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 WFDC9Q8NEX5 89 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 ICE1Q9Y2F5 2266 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 FAM90A9PA6NNJ1 464 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 SERF1AO75920 110 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 LINC00271P0C7V0 271 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 PYYP10082 97 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 NKAPP1Q8N9T2 125 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 OVOL2Q9BRP0 275 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 RSPO3Q9BXY4 272 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 TRBV6-7A0A0A0MS04 114 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 PRR4Q16378 134 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 DOCK5Q9H7D0 1870 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 ERCC8Q13216 396 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 SS18Q15532 418 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 MBNL3Q9NUK0 354 aaKnown RBP9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 SSBP2P81877 361 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 SPSB3Q6PJ21 355 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 RP1L1Q8IWN7 2480 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-215ENST00000399637 IGKV2-40A0A087WW87 121 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 IL18BPO95998 194 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 IGKV2D-40P01614 121 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 TIMP3P35625 211 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 NDPQ00604 133 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 ZNF474Q6S9Z5 364 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 OSTCQ9NRP0 149 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 RNF222A6NCQ9 220 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 RASL11AQ6T310 242 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 TEX43Q6ZNM6 134 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 TMEM170AQ8WVE7 144 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 PLEKHB2Q96CS7 222 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 GREM1O60565 184 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 A0A096LPF7 62 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 RAMP3O60896 148 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 IGHV1-46P01743 117 aa9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 SRSF8Q9BRL6 282 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 KLK5Q9Y337 293 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-215ENST00000399637 HAMPP81172 84 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 C9orf153Q5TBE3 101 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 IMMP1LQ96LU5 166 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 NDUFAF3Q9BU61 184 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 SVILO95425 2214 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 TRBV7-1A0A0A6YYK4 115 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 TMEM258P61165 79 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 LINC00477Q96M19 166 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 GNB1LQ9BYB4 327 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 SMPXQ9UHP9 88 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 IGHV2-26A0A0B4J1V2 119 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 TEX48A0A1B0GUV7 120 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 LEPROTO15243 131 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 ATRAIDQ6UW56 229 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 TMEM190Q8WZ59 177 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 LAMTOR2Q9Y2Q5 125 aa9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 COL11A1P12107 1806 aaPredicted RBP9.09□□□□□ -0.95
CACNA1C-215ENST00000399637 PLXNA1Q9UIW2 1896 aa9.09□□□□□ -0.96
CACNA1C-215ENST00000399637 A0A1W2PRE2 83 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 COL11A2P13942 1736 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 GATA3P23771 443 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 FOXL1Q12952 345 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 DMRTC2Q8IXT2 367 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 FBLN5Q9UBX5 448 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 TEX22C9J3V5 150 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 C15orf32Q32M92 178 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 C6orf226Q5I0X4 101 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 C15orf53Q8NAA6 179 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 Q9HAA7 133 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 ZNF876PQ49A33 203 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 MPLKIPQ8TAP9 179 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 TSKUQ8WUA8 353 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 MLNRO43193 412 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 CLPSL2Q6UWE3 100 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 C8orf31Q8N9H6 132 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 XCL2Q9UBD3 114 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 KLF12Q9Y4X4 402 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 THADAQ6YHU6 1953 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 HSD52Q0P140 79 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 IFI27L1Q96BM0 104 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 WBP1Q96G27 269 aa9.08□□□□□ -0.96
CACNA1C-215ENST00000399637 EFNA2O43921 213 aa9.07□□□□□ -0.96
CACNA1C-215ENST00000399637 RPL15P61313 204 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-215ENST00000399637 CCDC88CQ9P219 2028 aa9.07□□□□□ -0.96
CACNA1C-215ENST00000399637 PINLYPA6NC86 204 aa9.07□□□□□ -0.96
CACNA1C-215ENST00000399637 DEFB131AP59861 70 aa9.07□□□□□ -0.96
CACNA1C-215ENST00000399637 ZNF837Q96EG3 531 aaPredicted RBP9.07□□□□□ -0.96
CACNA1C-215ENST00000399637 TCF20Q9UGU0 1960 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-215ENST00000399637 EFNB3Q15768 340 aa9.07□□□□□ -0.96
CACNA1C-215ENST00000399637 GAGE13Q4V321 117 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms