RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 GFI1Q99684 422 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 TRAV3A0A0B4J244 114 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 K7ENP7 123 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 NAPSAO96009 420 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 SFTA2Q6UW10 78 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 SPAG8Q99932 426 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-203ENST00000394872 E7EQL1 145 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 IGHG3P01860 377 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 PLNP26678 52 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 SAA4P35542 130 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 RPL36AP83881 106 aaKnown RBP8.51□□□□□ -1.05
COL4A6-203ENST00000394872 SPATA31B1PQ5VZV4 182 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 ZNF474Q6S9Z5 364 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-203ENST00000394872 BMPERQ8N8U9 685 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 OR2K2Q8NGT1 345 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 DEFB104AQ8WTQ1 72 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 RPL36ALQ969Q0 106 aaKnown RBP8.51□□□□□ -1.05
COL4A6-203ENST00000394872 TRGV9Q99603 122 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 ESPL1Q14674 2120 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 A8MXK9 166 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 MPZP25189 248 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 LY6G6FQ5SQ64 297 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 GGTLC1Q9BX51 225 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 LAGE3Q14657 143 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 RUSC1-AS1Q66K80 236 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 GNB1LQ9BYB4 327 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 NHP2Q9NX24 153 aaKnown RBP8.5□□□□□ -1.05
COL4A6-203ENST00000394872 SRSF3P84103 164 aaKnown RBP8.5□□□□□ -1.05
COL4A6-203ENST00000394872 AHCTF1Q8WYP5 2266 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 F8VVB4 439 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 F8VWA3 439 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 INSP01308 110 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 ZNF876PQ49A33 203 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 MAPK1IP1LQ8NDC0 245 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 Q96MF0 132 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 C1QTNF4Q9BXJ3 329 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 ARHGEF17Q96PE2 2063 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-203ENST00000394872 ZNF138P52744 262 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 B3GALT5-AS1P59052 145 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 C9orf139Q6ZV77 190 aa8.5□□□□□ -1.05
COL4A6-203ENST00000394872 CHCHD1Q96BP2 118 aaKnown RBP8.5□□□□□ -1.05
COL4A6-203ENST00000394872 PNRC2Q9NPJ4 139 aaKnown RBP8.5□□□□□ -1.05
COL4A6-203ENST00000394872 HOXA3O43365 443 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-203ENST00000394872 H0YIZ8 118 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 MGST2Q99735 147 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 ANAPC13Q9BS18 74 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 H3BUT2 72 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 SIGLEC9Q9Y336 463 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 TRAV8-2A0A0B4J237 113 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 MSMBP08118 114 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 FOXL1Q12952 345 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 MORN3Q6PF18 240 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-203ENST00000394872 ATP5L2Q7Z4Y8 100 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 C5orf30Q96GV9 206 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 IGKV1D-17A0A075B6S4 117 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 CD300EQ496F6 205 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-203ENST00000394872 TMEM155Q4W5P6 130 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 LINC00477Q96M19 166 aa8.49□□□□□ -1.05
COL4A6-203ENST00000394872 NPC2P61916 151 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 TMEM249Q2WGJ8 235 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 KLHDC3Q9BQ90 382 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 Q6P435 159 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 LCN12Q6JVE5 192 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 IFI27L1Q96BM0 104 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 SLC25A2Q9BXI2 301 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 C5orf63A6NC05 138 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 NCR2O95944 276 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 SYNJ2BPP57105 145 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 IGFL4Q6B9Z1 124 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 RHPN1-AS1Q9BWJ2 59 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 JPT2Q9H910 190 aa8.48□□□□□ -1.05
COL4A6-203ENST00000394872 SH2D1AO60880 128 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 MEGF9Q9H1U4 602 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 GGTLC3B5MD39 225 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 TMEM190Q8WZ59 177 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 LINC01549A6NIU2 74 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 TOMM40O96008 361 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 Q8TAT8 98 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 A6NNC1 897 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 M0R2P5 195 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 GATA3P23771 443 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 LYZL1Q6UWQ5 148 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 ATRAIDQ6UW56 229 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 C5orf24Q7Z6I8 188 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 ANK1P16157 1881 aa8.47□□□□□ -1.05
COL4A6-203ENST00000394872 D6R8Y8 96 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 TCRAP04437 139 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 TRAV9-2A0A087WT02 112 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 LINC00473A8K010 186 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 ERCC8Q13216 396 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 FNDC4Q9H6D8 234 aaPredicted RBP8.46□□□□□ -1.05
COL4A6-203ENST00000394872 J3QKU1 62 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 DEFB130BP0DP73 79 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 DEFB130AP0DP74 79 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 TEX43Q6ZNM6 134 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 SIGMAR1Q99720 223 aa8.46□□□□□ -1.05
COL4A6-203ENST00000394872 LSM4Q9Y4Z0 139 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms