RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 GAR1Q9NY12 217 aaKnown RBP16.66■□□□□ 0.26
SPHK1-202ENST00000392496 PRRC2AP48634 2157 aaKnown RBP16.66■□□□□ 0.26
SPHK1-202ENST00000392496 C9JCJ5 164 aa16.66■□□□□ 0.26
SPHK1-202ENST00000392496 H3BRN7 92 aa16.66■□□□□ 0.26
SPHK1-202ENST00000392496 CLDN34H7C241 214 aa16.66■□□□□ 0.26
SPHK1-202ENST00000392496 IGHV3-23P01764 117 aa16.66■□□□□ 0.26
SPHK1-202ENST00000392496 CTSGP08311 255 aa16.66■□□□□ 0.26
SPHK1-202ENST00000392496 LINC01551Q86U37 167 aa16.66■□□□□ 0.26
SPHK1-202ENST00000392496 OR2T8A6NH00 312 aa16.65■□□□□ 0.26
SPHK1-202ENST00000392496 CRYBB3P26998 211 aa16.65■□□□□ 0.26
SPHK1-202ENST00000392496 FAM24BQ8N5W8 94 aa16.65■□□□□ 0.26
SPHK1-202ENST00000392496 TCEAL7Q9BRU2 100 aa16.65■□□□□ 0.26
SPHK1-202ENST00000392496 ELOVL1Q9BW60 279 aa16.65■□□□□ 0.26
SPHK1-202ENST00000392496 SVEP1Q4LDE5 3571 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 NBEAP1P0C6P0 100 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 C2CD4CQ8TF44 421 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 LY96Q9Y6Y9 160 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 TRBV20OR9-2A0A075B6H5 130 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 BRI3O95415 125 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 FOLR2P14207 255 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 MYCNOSP40205 109 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 RPL35P42766 123 aaKnown RBP16.64■□□□□ 0.25
SPHK1-202ENST00000392496 LEMD1Q68G75 181 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 ZNF329Q86UD4 541 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 EEF1AKMT3Q96AZ1 226 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 ANAPC16Q96DE5 110 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 ATP6V0BQ99437 205 aa16.64■□□□□ 0.25
SPHK1-202ENST00000392496 TRBV7-1A0A0A6YYK4 115 aa16.63■□□□□ 0.25
SPHK1-202ENST00000392496 IER3P46695 156 aa16.63■□□□□ 0.25
SPHK1-202ENST00000392496 USF2Q15853 346 aaPredicted RBP16.63■□□□□ 0.25
SPHK1-202ENST00000392496 ZNF600Q6ZNG1 722 aa16.63■□□□□ 0.25
SPHK1-202ENST00000392496 OR5R1Q8NH85 324 aa16.63■□□□□ 0.25
SPHK1-202ENST00000392496 CHRDL1Q9BU40 450 aa16.63■□□□□ 0.25
SPHK1-202ENST00000392496 HELTA6NFD8 242 aa16.62■□□□□ 0.25
SPHK1-202ENST00000392496 FAM223BA6NKX1 122 aa16.62■□□□□ 0.25
SPHK1-202ENST00000392496 HIST1H1EP10412 219 aaKnown RBP16.62■□□□□ 0.25
SPHK1-202ENST00000392496 ADMP35318 185 aa16.62■□□□□ 0.25
SPHK1-202ENST00000392496 ELOBQ15370 118 aa16.62■□□□□ 0.25
SPHK1-202ENST00000392496 FAM223AQ8IWN6 122 aa16.62■□□□□ 0.25
SPHK1-202ENST00000392496 MS4A10Q96PG2 267 aa16.62■□□□□ 0.25
SPHK1-202ENST00000392496 H3BUA1 57 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 IGHV4-59P01825 116 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 CRYBA1P05813 215 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 CD99P14209 185 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 GPR183P32249 361 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 BLCAPP62952 87 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 BPIFA4PQ86YQ2 179 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 BLNKQ8WV28 456 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 LINC00527Q9UJ94 153 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 ZNF580Q9UK33 172 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 RNF24Q9Y225 148 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 PDZD2O15018 2839 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 AP4M1O00189 453 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 RAB5AP20339 215 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 PPIFP30405 207 aaKnown RBP16.61■□□□□ 0.25
SPHK1-202ENST00000392496 RANP62826 216 aaKnown RBP16.61■□□□□ 0.25
SPHK1-202ENST00000392496 ATP5G2Q06055 141 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 OCC1Q8TAD7 63 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 CCDC140Q96MF4 163 aa16.61■□□□□ 0.25
SPHK1-202ENST00000392496 MAP1AP78559 2803 aaPredicted RBP16.61■□□□□ 0.25
SPHK1-202ENST00000392496 ZNF98A6NK75 572 aa16.6■□□□□ 0.25
SPHK1-202ENST00000392496 H7BYZ3 331 aa16.6■□□□□ 0.25
SPHK1-202ENST00000392496 CLEC3BP05452 202 aa16.6■□□□□ 0.25
SPHK1-202ENST00000392496 PGPEP1LA6NFU8 196 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 S100A7P31151 101 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 WFDC11Q8NEX6 87 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 TMEM190Q8WZ59 177 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 SETXQ7Z333 2677 aaKnown RBP16.59■□□□□ 0.25
SPHK1-202ENST00000392496 PPP1R2P9O14990 202 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 TAS2R60P59551 318 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 Q6YL49 198 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 OR4F17Q8NGA8 305 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 ZNF586Q9NXT0 402 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 URGCP-MRPS24S4R325 110 aa16.59■□□□□ 0.25
SPHK1-202ENST00000392496 CSPG4Q6UVK1 2322 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 PGPA6NDG6 321 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 PEX7O00628 323 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 MRPS12O15235 138 aaKnown RBP16.58■□□□□ 0.24
SPHK1-202ENST00000392496 TGOLN2O43493 480 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 TRGV3P03979 118 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 SNRPCP09234 159 aaKnown RBP16.58■□□□□ 0.24
SPHK1-202ENST00000392496 GNG4P50150 75 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 CENPWQ5EE01 88 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 CLEC19AQ6UXS0 136 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 ZNF414Q96IQ9 312 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 AURKAIP1Q9NWT8 199 aaPredicted RBP16.58■□□□□ 0.24
SPHK1-202ENST00000392496 MLXQ9UH92 298 aa16.58■□□□□ 0.24
SPHK1-202ENST00000392496 BMPR1BO00238 502 aa16.57■□□□□ 0.24
SPHK1-202ENST00000392496 CNN1P51911 297 aaKnown RBP16.57■□□□□ 0.24
SPHK1-202ENST00000392496 Q6ZS46 218 aa16.57■□□□□ 0.24
SPHK1-202ENST00000392496 NOL4LQ96MY1 436 aaPredicted RBP16.57■□□□□ 0.24
SPHK1-202ENST00000392496 Q9H3A6 140 aa16.57■□□□□ 0.24
SPHK1-202ENST00000392496 PRDM13Q9H4Q3 707 aa16.57■□□□□ 0.24
SPHK1-202ENST00000392496 RABAC1Q9UI14 185 aa16.57■□□□□ 0.24
SPHK1-202ENST00000392496 CDC42EP3Q9UKI2 254 aa16.57■□□□□ 0.24
SPHK1-202ENST00000392496 EPDR1Q9UM22 224 aa16.57■□□□□ 0.24
SPHK1-202ENST00000392496 CELSR1Q9NYQ6 3014 aa16.57■□□□□ 0.24
SPHK1-202ENST00000392496 LOC105371267A0A1B0GV96 52 aa16.56■□□□□ 0.24
SPHK1-202ENST00000392496 SLC25A5P05141 298 aaKnown RBP16.56■□□□□ 0.24
SPHK1-202ENST00000392496 IGLC2P0DOY2 106 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms