RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 CT45A7P0DMV0 189 aa14.23□□□□□ -0.13
SQSTM1-202ENST00000389805 TEX45Q8NA69 505 aa14.23□□□□□ -0.13
SQSTM1-202ENST00000389805 HIST1H1EP10412 219 aaKnown RBP14.23□□□□□ -0.13
SQSTM1-202ENST00000389805 ARF6P62330 175 aa14.23□□□□□ -0.13
SQSTM1-202ENST00000389805 HBBP68871 147 aa14.23□□□□□ -0.13
SQSTM1-202ENST00000389805 HIST1H1AQ02539 215 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-202ENST00000389805 MAP1LC3CQ9BXW4 147 aa14.23□□□□□ -0.13
SQSTM1-202ENST00000389805 REG1BP48304 166 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 ZNF329Q86UD4 541 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 CCL17Q92583 94 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 ZNF430Q9H8G1 570 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 FOXA2Q9Y261 457 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 HILPDAQ9Y5L2 63 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 LRBAP50851 2863 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 NAV3Q8IVL0 2385 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 PRB4P10163 310 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 GFRALQ6UXV0 394 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 PAXXQ9BUH6 204 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 A0A1B0GXF2 115 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 H3BTX0 84 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 HTR1DP28221 377 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 FAM231DQ6ZW35 169 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 TMEM116Q8NCL8 245 aa14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 RPUSD1Q9UJJ7 312 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-202ENST00000389805 C17orf100A8MU93 164 aa14.21□□□□□ -0.13
SQSTM1-202ENST00000389805 KIR2DS2P43631 304 aa14.21□□□□□ -0.13
SQSTM1-202ENST00000389805 RAB37Q96AX2 223 aa14.21□□□□□ -0.13
SQSTM1-202ENST00000389805 PLXNB1O43157 2135 aa14.21□□□□□ -0.13
SQSTM1-202ENST00000389805 H3BUT2 72 aa14.21□□□□□ -0.14
SQSTM1-202ENST00000389805 GTSF1Q8WW33 167 aa14.21□□□□□ -0.14
SQSTM1-202ENST00000389805 AP1S3Q96PC3 154 aa14.21□□□□□ -0.14
SQSTM1-202ENST00000389805 JMJD8Q96S16 334 aa14.21□□□□□ -0.14
SQSTM1-202ENST00000389805 TMUB1Q9BVT8 246 aa14.21□□□□□ -0.14
SQSTM1-202ENST00000389805 PTPRQQ9UMZ3 2332 aa14.2□□□□□ -0.14
SQSTM1-202ENST00000389805 LYPD2Q6UXB3 125 aa14.2□□□□□ -0.14
SQSTM1-202ENST00000389805 SLC25A48Q6ZT89 311 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-202ENST00000389805 C2orf91Q6ZV80 131 aa14.2□□□□□ -0.14
SQSTM1-202ENST00000389805 BPIFA4PQ86YQ2 179 aa14.2□□□□□ -0.14
SQSTM1-202ENST00000389805 NUP37Q8NFH4 326 aa14.2□□□□□ -0.14
SQSTM1-202ENST00000389805 COX7A2P2O60397 106 aa14.2□□□□□ -0.14
SQSTM1-202ENST00000389805 DIAPH2-AS1Q14236 149 aa14.2□□□□□ -0.14
SQSTM1-202ENST00000389805 NCOR1P1Q9H4R4 102 aa14.2□□□□□ -0.14
SQSTM1-202ENST00000389805 SLC25A5P05141 298 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 TEX36Q5VZQ5 186 aa14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 ABCA4P78363 2273 aa14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 HLA-DRB1P01911 266 aa14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 H1FXQ92522 213 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 ZZEF1O43149 2961 aa14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 hADV38S2A0JD32 116 aa14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 NCR2O95944 276 aa14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 FOXC1Q12948 553 aa14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 RTL8BQ17RB0 113 aa14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 TMEM97Q5BJF2 176 aa14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-202ENST00000389805 CHEK1O14757 476 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 TNFRSF1AP19438 455 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 CHCHD1Q96BP2 118 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 MRPL20Q9BYC9 149 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 DCHS2Q6V1P9 2916 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 MOSP00540 346 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 LIPFP07098 398 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 PAX2Q02962 417 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 TMEM177Q53S58 311 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 TMEM200BQ69YZ2 307 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 ASCL5Q7RTU5 278 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 OR1N2Q8NGR9 330 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 C7orf69Q9H7B7 122 aa14.18□□□□□ -0.14
SQSTM1-202ENST00000389805 PGPA6NDG6 321 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 ATP5L2Q7Z4Y8 100 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 RAB9BQ9NP90 201 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 TEX50A0A1B0GTY4 177 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 SAA1P0DJI8 122 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 NBL1P41271 181 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 PRB3Q04118 309 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 C10orf113Q5VZT2 155 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 PATE2Q6UY27 113 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 C5orf17Q8NAS9 161 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 RPP21Q9H633 154 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 LINC00574Q9H8X3 128 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 C1RLQ9NZP8 487 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 LINC00312Q9Y6C7 94 aa14.17□□□□□ -0.14
SQSTM1-202ENST00000389805 E7EUB6 86 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 DLX1P56177 255 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 PRCDQ00LT1 54 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 FAM162BQ5T6X4 162 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 PET117Q6UWS5 81 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 IGF2RP11717 2491 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 G3V4G9 280 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 UPK2O00526 184 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 P01737 135 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 NBEAP1P0C6P0 100 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 RNASE2P10153 161 aaKnown RBP14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 COX8AP10176 69 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 CD69Q07108 199 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 ADTRPQ96IZ2 230 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 PSMB11A5LHX3 300 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 CIDEAO60543 219 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 OR5AL1P0C617 328 aa14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 Q71RC1 249 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-202ENST00000389805 COL12A1Q99715 3063 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms