RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 ZNF581Q9P0T4 197 aa12.02□□□□□ -0.48
PRDM16-203ENST00000378391 VWC2LB2RUY7 222 aa12.02□□□□□ -0.49
PRDM16-203ENST00000378391 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.49
PRDM16-203ENST00000378391 TCRBV4S1A1TA0A5B7 111 aa12.02□□□□□ -0.49
PRDM16-203ENST00000378391 FABP5P3A8MUU1 101 aa12.02□□□□□ -0.49
PRDM16-203ENST00000378391 GGTLC1Q9BX51 225 aa12.02□□□□□ -0.49
PRDM16-203ENST00000378391 TIMP3P35625 211 aa12.02□□□□□ -0.49
PRDM16-203ENST00000378391 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.49
PRDM16-203ENST00000378391 OBSL1O75147 1896 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 KIR3DS1Q14943 382 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 C17orf100A8MU93 164 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 TRGV3P03979 118 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 DENND4AQ7Z401 1863 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 SPTBN1Q01082 2364 aaKnown RBP12.01□□□□□ -0.49
PRDM16-203ENST00000378391 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 OR9G9P0C7N8 305 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 ANXA2RQ3ZCQ2 193 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 DEPPQ9NTK1 212 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 TRIOBPQ9H2D6 2365 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 PPBPP02775 128 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 PVRIGQ6DKI7 326 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 ATP5L2Q7Z4Y8 100 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 ABCA7Q8IZY2 2146 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 CHCHD1Q96BP2 118 aaKnown RBP12.01□□□□□ -0.49
PRDM16-203ENST00000378391 ASCL2Q99929 193 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 CNOT1A5YKK6 2376 aaKnown RBP12.01□□□□□ -0.49
PRDM16-203ENST00000378391 MUC21A0A0G2JKD1 596 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 MUC21A0A140T8X8 626 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 ERVK11-1P61568 191 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 MUC21Q5SSG8 566 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 BCL6BQ8N143 479 aaPredicted RBP12.01□□□□□ -0.49
PRDM16-203ENST00000378391 ZIC4Q8N9L1 334 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 TSKUQ8WUA8 353 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 ARPC1AQ92747 370 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 SNHG12Q9BXW3 62 aa12.01□□□□□ -0.49
PRDM16-203ENST00000378391 IGKV1-27A0A075B6S5 117 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 IGHV3OR16-12A0A075B7B8 117 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 A8MWP6 167 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 E9PLN8 166 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 HBDP02042 147 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 SPSB3Q6PJ21 355 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 NUP210Q8TEM1 1887 aaPredicted RBP12□□□□□ -0.49
PRDM16-203ENST00000378391 SELLP14151 372 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 TREML4Q6UXN2 200 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 PPDPFLQ8WWR9 84 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 FANCMQ8IYD8 2048 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 SUMO2P61956 95 aaKnown RBP12□□□□□ -0.49
PRDM16-203ENST00000378391 IL15RAQ13261 267 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 LY6EQ16553 131 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 RPP25LQ8N5L8 163 aaKnown RBP12□□□□□ -0.49
PRDM16-203ENST00000378391 C9JCJ5 164 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 NDUFA3O95167 84 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 S4R3C0 116 aa12□□□□□ -0.49
PRDM16-203ENST00000378391 SRSF2Q01130 221 aaKnown RBP11.99□□□□□ -0.49
PRDM16-203ENST00000378391 NABP1Q96AH0 204 aa11.99□□□□□ -0.49
PRDM16-203ENST00000378391 PYYP10082 97 aa11.99□□□□□ -0.49
PRDM16-203ENST00000378391 LINC01551Q86U37 167 aa11.99□□□□□ -0.49
PRDM16-203ENST00000378391 TMEM190Q8WZ59 177 aa11.99□□□□□ -0.49
PRDM16-203ENST00000378391 NPFFO15130 113 aa11.99□□□□□ -0.49
PRDM16-203ENST00000378391 PDLIM4P50479 330 aa11.99□□□□□ -0.49
PRDM16-203ENST00000378391 IGHV3-49A0A0A0MS15 119 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 CCL3L1P16619 93 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 CT83Q5H943 113 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 TNFRSF18Q9Y5U5 241 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 LEPP41159 167 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 SLC50A1Q9BRV3 221 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 DPM2O94777 84 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 IGHV3-23P01764 117 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 TMEM14EPQ6UXP3 125 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 C9orf106Q8NAJ2 232 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 LYPD6BQ8NI32 183 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 NEU4Q8WWR8 484 aaPredicted RBP11.98□□□□□ -0.49
PRDM16-203ENST00000378391 RNF125Q96EQ8 232 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 C1QTNF4Q9BXJ3 329 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 PSG8Q9UQ74 426 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 TRAV41A0A0B4J266 112 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 FGFBP3Q8TAT2 258 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 PLA2G2EQ9NZK7 142 aa11.98□□□□□ -0.49
PRDM16-203ENST00000378391 SLC25A20O43772 301 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 TDGF1P13385 188 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 BSPH1Q075Z2 132 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 PAX1P15863 534 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 LINC01560Q8TB33 94 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 SPATA25Q9BR10 227 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 AGMATQ9BSE5 352 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 A0A087X0K7 114 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 NBR2O15453 112 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 LTBRP36941 435 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 ETDBQ3ZM63 59 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 VKORC1Q9BQB6 163 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 LIME1Q9H400 295 aa11.97□□□□□ -0.49
PRDM16-203ENST00000378391 EP300Q09472 2414 aaPredicted RBP11.96□□□□□ -0.49
PRDM16-203ENST00000378391 FAM231BA6NCW3 169 aa11.96□□□□□ -0.49
PRDM16-203ENST00000378391 IGKV3-20P01619 116 aa11.96□□□□□ -0.49
PRDM16-203ENST00000378391 C5orf24Q7Z6I8 188 aa11.96□□□□□ -0.49
PRDM16-203ENST00000378391 FAM57AQ8TBR7 257 aa11.96□□□□□ -0.49
PRDM16-203ENST00000378391 COQ2Q96H96 371 aa11.96□□□□□ -0.49
PRDM16-203ENST00000378391 IGHV3-66A0A0C4DH42 116 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms