RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 COLCA1Q6ZS62 124 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 RAX2Q96IS3 184 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 SEPSECSQ9HD40 501 aaKnown RBP6.91□□□□□ -1.3
VPS36-201ENST00000378060 ZNF407Q9C0G0 2248 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 IGF2RP11717 2491 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 MYO7BQ6PIF6 2116 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 C15orf62A8K5M9 175 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 PFN1P07737 140 aaKnown RBP6.91□□□□□ -1.3
VPS36-201ENST00000378060 GZMBP10144 247 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 Q6ZRM9 215 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 OR9G4Q8NGQ1 327 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 MBNL3Q9NUK0 354 aaKnown RBP6.91□□□□□ -1.3
VPS36-201ENST00000378060 COL6A6A6NMZ7 2263 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 F2Z2F3 143 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 H3BUT2 72 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 PAX1P15863 534 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 PDLIM4P50479 330 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 B3GALT5-AS1P59052 145 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 PRSS8Q16651 343 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 TMEM167AQ8TBQ9 72 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 IFI27L1Q96BM0 104 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 PIMREGQ9BSJ6 248 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 DERL1Q9BUN8 251 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 SPRR3Q9UBC9 169 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 A0A0G2JRQ6 117 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 CRXO43186 299 aaPredicted RBP6.9□□□□□ -1.3
VPS36-201ENST00000378060 OR2K2Q8NGT1 345 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 SMPXQ9UHP9 88 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 ITGB1BP1O14713 200 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 CEACAM4O75871 244 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 DPM2O94777 84 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 NTF4P34130 210 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 HSD52Q0P140 79 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 ZNF664Q8N3J9 261 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 TRGV9Q99603 122 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 RNF5Q99942 180 aa6.9□□□□□ -1.3
VPS36-201ENST00000378060 IGHV3OR16-13A0A075B7E8 117 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 IGHV3-74A0A0B4J1X5 117 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 IGHV1-46P01743 117 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 ZNF585BQ52M93 769 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 FAM74A4Q5TZK3 123 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 BMPERQ8N8U9 685 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 ITPR1Q14643 2758 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 LEPP41159 167 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 LINC01560Q8TB33 94 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 COQ2Q96H96 371 aa6.9□□□□□ -1.31
VPS36-201ENST00000378060 MRPS16Q9Y3D3 137 aaKnown RBP6.9□□□□□ -1.31
VPS36-201ENST00000378060 TMEM50AO95807 157 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 CA1P00915 261 aaPredicted RBP6.89□□□□□ -1.31
VPS36-201ENST00000378060 SPATA31B1PQ5VZV4 182 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 OR10W1Q8NGF6 305 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 SLX1AQ9BQ83 275 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 LINC00473A8K010 186 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 SRSF1Q07955 248 aaKnown RBP eCLIP6.89□□□□□ -1.314e-6■□□□□ 10.9
VPS36-201ENST00000378060 Q0VG73 95 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 ORMDL2Q53FV1 153 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 CACNA1BQ00975 2339 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 ANKRD11Q6UB99 2663 aaPredicted RBP6.89□□□□□ -1.31
VPS36-201ENST00000378060 MUC21A0A0G2JKD1 596 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 MUC21A0A140T8X8 626 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 FAM181BA6NEQ2 426 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 UBE2L6O14933 153 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 TFF1P04155 84 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 TYMSP04818 313 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 CACNG7P62955 275 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 MUC21Q5SSG8 566 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 SLC25A2Q9BXI2 301 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 ZNF581Q9P0T4 197 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 S4R3C0 116 aa6.89□□□□□ -1.31
VPS36-201ENST00000378060 TRAV5A0A0B4J249 113 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 A8MWP6 167 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 IGHV2-5P01817 119 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 TCRAP04437 139 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 CD177Q8N6Q3 437 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 RNASE6Q93091 150 aaKnown RBP6.88□□□□□ -1.31
VPS36-201ENST00000378060 C20orf144Q9BQM9 153 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 CADP27708 2225 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 KLRB1Q12918 225 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 IGKV1-6A0A0C4DH72 117 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 ERVK11-1P61568 191 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 SRSF6Q13247 344 aaKnown RBP6.88□□□□□ -1.31
VPS36-201ENST00000378060 IL15RAQ13261 267 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 RRN3P1Q2M238 152 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 LYPD1Q8N2G4 141 aa6.88□□□□□ -1.31
VPS36-201ENST00000378060 NHP2Q9NX24 153 aaKnown RBP6.88□□□□□ -1.31
VPS36-201ENST00000378060 IGHV3-49A0A0A0MS15 119 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 A0A1B0GWJ7 208 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 IGKV3-15P01624 115 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 MEIG1Q5JSS6 88 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 LDLRAD2Q5SZI1 272 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 FAM169BQ8N8A8 192 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 TNFRSF18Q9Y5U5 241 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 TRAV21A0A0B4J279 112 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 LMO1P25800 156 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 CLEC19AQ6UXS0 136 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 C20orf204Q6ZNR8 217 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 SLC25A15Q9Y619 301 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 NOTCH3Q9UM47 2321 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms