RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 C9orf139Q6ZV77 190 aa13.78□□□□□ -0.2
CTTN-203ENST00000376561 CHRDL1Q9BU40 450 aa13.78□□□□□ -0.2
CTTN-203ENST00000376561 ADMP35318 185 aa13.78□□□□□ -0.2
CTTN-203ENST00000376561 USF2Q15853 346 aaPredicted RBP13.78□□□□□ -0.2
CTTN-203ENST00000376561 Q6ZS46 218 aa13.78□□□□□ -0.2
CTTN-203ENST00000376561 SHANK2-AS3Q9BTD1 123 aa13.78□□□□□ -0.2
CTTN-203ENST00000376561 H3BRN7 92 aa13.77□□□□□ -0.21
CTTN-203ENST00000376561 NBEAP1P0C6P0 100 aa13.77□□□□□ -0.21
CTTN-203ENST00000376561 GPR183P32249 361 aa13.77□□□□□ -0.21
CTTN-203ENST00000376561 LINC01551Q86U37 167 aa13.77□□□□□ -0.21
CTTN-203ENST00000376561 CIARTQ8N365 385 aaPredicted RBP13.77□□□□□ -0.21
CTTN-203ENST00000376561 ELOVL1Q9BW60 279 aa13.77□□□□□ -0.21
CTTN-203ENST00000376561 TMEM242Q9NWH2 141 aa13.77□□□□□ -0.21
CTTN-203ENST00000376561 CXorf65A6NEN9 183 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 ZNF600Q6ZNG1 722 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 FAM24BQ8N5W8 94 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 BLNKQ8WV28 456 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 HIST1H2BAQ96A08 127 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 CCDC140Q96MF4 163 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 TMEM14CQ9P0S9 112 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 ZNF469Q96JG9 3925 aaPredicted RBP13.76□□□□□ -0.21
CTTN-203ENST00000376561 CLEC3BP05452 202 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 ATF4P18848 351 aaPredicted RBP13.76□□□□□ -0.21
CTTN-203ENST00000376561 RPL35P42766 123 aaKnown RBP13.76□□□□□ -0.21
CTTN-203ENST00000376561 EEF1AKMT3Q96AZ1 226 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 NOL4LQ96MY1 436 aaPredicted RBP13.76□□□□□ -0.21
CTTN-203ENST00000376561 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 PRELID1Q9Y255 219 aa13.76□□□□□ -0.21
CTTN-203ENST00000376561 PGPEP1LA6NFU8 196 aa13.75□□□□□ -0.21
CTTN-203ENST00000376561 MT-ND4LP03901 98 aa13.75□□□□□ -0.21
CTTN-203ENST00000376561 PPIFP30405 207 aaKnown RBP13.75□□□□□ -0.21
CTTN-203ENST00000376561 RANP62826 216 aaKnown RBP13.75□□□□□ -0.21
CTTN-203ENST00000376561 OR5R1Q8NH85 324 aa13.75□□□□□ -0.21
CTTN-203ENST00000376561 C2CD4CQ8TF44 421 aa13.75□□□□□ -0.21
CTTN-203ENST00000376561 CTDSP1Q9GZU7 261 aa13.75□□□□□ -0.21
CTTN-203ENST00000376561 GAR1Q9NY12 217 aaKnown RBP13.75□□□□□ -0.21
CTTN-203ENST00000376561 TRBV7-1A0A0A6YYK4 115 aa13.75□□□□□ -0.21
CTTN-203ENST00000376561 MYCNOSP40205 109 aa13.75□□□□□ -0.21
CTTN-203ENST00000376561 ZNF329Q86UD4 541 aa13.75□□□□□ -0.21
CTTN-203ENST00000376561 AURKAIP1Q9NWT8 199 aaPredicted RBP13.75□□□□□ -0.21
CTTN-203ENST00000376561 HELTA6NFD8 242 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 FAM223BA6NKX1 122 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 CLDN34H7C241 214 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 AP4M1O00189 453 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 ATP5G2Q06055 141 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 CLEC19AQ6UXS0 136 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 Q6YL49 198 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 S100A7AQ86SG5 101 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 FAM223AQ8IWN6 122 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 ITPR3Q14573 2671 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 TEX15Q9BXT5 2789 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 C9JCJ5 164 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 PDZD2O15018 2839 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 TRGV3P03979 118 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 BPIFA4PQ86YQ2 179 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 ZNF414Q96IQ9 312 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 URGCP-MRPS24S4R325 110 aa13.74□□□□□ -0.21
CTTN-203ENST00000376561 ZNF98A6NK75 572 aa13.73□□□□□ -0.21
CTTN-203ENST00000376561 BRI3O95415 125 aa13.73□□□□□ -0.21
CTTN-203ENST00000376561 HIST1H1EP10412 219 aaKnown RBP13.73□□□□□ -0.21
CTTN-203ENST00000376561 ELOBQ15370 118 aa13.73□□□□□ -0.21
CTTN-203ENST00000376561 OCC1Q8TAD7 63 aa13.73□□□□□ -0.21
CTTN-203ENST00000376561 ZNF586Q9NXT0 402 aa13.73□□□□□ -0.21
CTTN-203ENST00000376561 IGHV3-35A0A0C4DH35 117 aa13.72□□□□□ -0.21
CTTN-203ENST00000376561 H3BTX0 84 aa13.72□□□□□ -0.21
CTTN-203ENST00000376561 H3BUA1 57 aa13.72□□□□□ -0.21
CTTN-203ENST00000376561 SMAD7O15105 426 aaKnown RBP13.72□□□□□ -0.21
CTTN-203ENST00000376561 CCDC168Q8NDH2 2452 aa13.72□□□□□ -0.21
CTTN-203ENST00000376561 PGPA6NDG6 321 aa13.72□□□□□ -0.21
CTTN-203ENST00000376561 CRYBA1P05813 215 aa13.72□□□□□ -0.21
CTTN-203ENST00000376561 TCEAL7Q9BRU2 100 aa13.72□□□□□ -0.21
CTTN-203ENST00000376561 VPREB3Q9UKI3 123 aa13.72□□□□□ -0.21
CTTN-203ENST00000376561 TGOLN2O43493 480 aa13.71□□□□□ -0.21
CTTN-203ENST00000376561 TPPP2P59282 170 aa13.71□□□□□ -0.21
CTTN-203ENST00000376561 ANAPC16Q96DE5 110 aa13.71□□□□□ -0.21
CTTN-203ENST00000376561 ATP6V0BQ99437 205 aa13.71□□□□□ -0.21
CTTN-203ENST00000376561 FOXC2Q99958 501 aa13.71□□□□□ -0.21
CTTN-203ENST00000376561 GNB4Q9HAV0 340 aa13.71□□□□□ -0.21
CTTN-203ENST00000376561 LY96Q9Y6Y9 160 aa13.71□□□□□ -0.21
CTTN-203ENST00000376561 GCN1Q92616 2671 aaKnown RBP13.71□□□□□ -0.21
CTTN-203ENST00000376561 H7BYZ3 331 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 MRPS12O15235 138 aaKnown RBP13.71□□□□□ -0.22
CTTN-203ENST00000376561 IGLC2P0DOY2 106 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 HNF1AP20823 631 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 CENPWQ5EE01 88 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 TOMM20LQ6UXN7 152 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 OR4F17Q8NGA8 305 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 Q9H3A6 140 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 PRDM13Q9H4Q3 707 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 RABAC1Q9UI14 185 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 ZNF580Q9UK33 172 aa13.71□□□□□ -0.22
CTTN-203ENST00000376561 BMPR1BO00238 502 aa13.7□□□□□ -0.22
CTTN-203ENST00000376561 PEX7O00628 323 aa13.7□□□□□ -0.22
CTTN-203ENST00000376561 RAB5AP20339 215 aa13.7□□□□□ -0.22
CTTN-203ENST00000376561 GNG4P50150 75 aa13.7□□□□□ -0.22
CTTN-203ENST00000376561 ZFAND3Q9H8U3 227 aa13.7□□□□□ -0.22
CTTN-203ENST00000376561 RNF24Q9Y225 148 aa13.7□□□□□ -0.22
CTTN-203ENST00000376561 SLC25A5P05141 298 aaKnown RBP13.7□□□□□ -0.22
CTTN-203ENST00000376561 FOLR2P14207 255 aa13.7□□□□□ -0.22
CTTN-203ENST00000376561 CD99P14209 185 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms