RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 PMCHL2Q9BQD1 86 aa12.16□□□□□ -0.46
MSH5-203ENST00000375750 PPP1R14DQ9NXH3 145 aa12.16□□□□□ -0.46
MSH5-203ENST00000375750 EPDR1Q9UM22 224 aa12.16□□□□□ -0.46
MSH5-203ENST00000375750 IGHV2-26A0A0B4J1V2 119 aa12.16□□□□□ -0.46
MSH5-203ENST00000375750 APOA2P02652 100 aa12.16□□□□□ -0.46
MSH5-203ENST00000375750 CBY1Q9Y3M2 126 aa12.16□□□□□ -0.46
MSH5-203ENST00000375750 TMEM200BQ69YZ2 307 aa12.15□□□□□ -0.46
MSH5-203ENST00000375750 LYPD2Q6UXB3 125 aa12.15□□□□□ -0.46
MSH5-203ENST00000375750 FAM231DQ6ZW35 169 aa12.15□□□□□ -0.46
MSH5-203ENST00000375750 CACNG8Q8WXS5 425 aa12.15□□□□□ -0.46
MSH5-203ENST00000375750 PRORYQ9H606 182 aa12.15□□□□□ -0.46
MSH5-203ENST00000375750 A0A1W2PPI3 338 aa12.15□□□□□ -0.46
MSH5-203ENST00000375750 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
MSH5-203ENST00000375750 PDPNQ86YL7 162 aa12.15□□□□□ -0.46
MSH5-203ENST00000375750 A0A1B0GXF2 115 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 hADV38S2A0JD32 116 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 ENSAO43768 121 aaKnown RBP12.14□□□□□ -0.47
MSH5-203ENST00000375750 GATA4P43694 442 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 OR10X1Q8NGY0 326 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 OSR1Q8TAX0 266 aaPredicted RBP12.14□□□□□ -0.47
MSH5-203ENST00000375750 COX11Q9Y6N1 276 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 CNTFRP26992 372 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 MYCNOSP40205 109 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 FOXE3Q13461 319 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 RAB9BQ9NP90 201 aa12.14□□□□□ -0.47
MSH5-203ENST00000375750 OR4C46A6NHA9 309 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 HIST1H1EP10412 219 aaKnown RBP12.13□□□□□ -0.47
MSH5-203ENST00000375750 OR5AN1Q8NGI8 311 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 OR1L4Q8NGR5 311 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 IGLC7A0M8Q6 106 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 OR2J3O76001 311 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 CSN3P07498 182 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 ADORA2A-AS1P86434 159 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 TMEM177Q53S58 311 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 MPV17L2Q567V2 206 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 ZNF596Q8TC21 504 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 ORAOV1Q8WV07 137 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 NCOR1P1Q9H4R4 102 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 LINC00574Q9H8X3 128 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 MRPS16Q9Y3D3 137 aaKnown RBP12.13□□□□□ -0.47
MSH5-203ENST00000375750 LOC105371242A0A075B767 164 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 SHISA9B4DS77 424 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 NBEAP1P0C6P0 100 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 BPIFB3P59826 476 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 CIARTQ8N365 385 aaPredicted RBP12.13□□□□□ -0.47
MSH5-203ENST00000375750 LINC00312Q9Y6C7 94 aa12.13□□□□□ -0.47
MSH5-203ENST00000375750 TNFSF4P23510 183 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 MRGPRG-AS1Q2M3A8 158 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 TMEM167AQ8TBQ9 72 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 TMEM70Q9BUB7 260 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 RPP21Q9H633 154 aaKnown RBP12.12□□□□□ -0.47
MSH5-203ENST00000375750 NKX6-3A6NJ46 265 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 C17orf100A8MU93 164 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 E7EQL1 145 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 HBBP68871 147 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 MUC15Q8N387 334 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 NGBQ9NPG2 151 aa12.12□□□□□ -0.47
MSH5-203ENST00000375750 UBE2V1Q13404 147 aa12.11□□□□□ -0.47
MSH5-203ENST00000375750 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
MSH5-203ENST00000375750 ZNF738Q8NE65 137 aa12.11□□□□□ -0.47
MSH5-203ENST00000375750 CCL17Q92583 94 aa12.11□□□□□ -0.47
MSH5-203ENST00000375750 ZC2HC1AQ96GY0 325 aa12.11□□□□□ -0.47
MSH5-203ENST00000375750 GPR82Q96P67 336 aa12.11□□□□□ -0.47
MSH5-203ENST00000375750 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
MSH5-203ENST00000375750 EXOC3-AS1Q8N2X6 119 aa12.11□□□□□ -0.47
MSH5-203ENST00000375750 OR4C13Q8NGP0 309 aa12.11□□□□□ -0.47
MSH5-203ENST00000375750 CACNA1AO00555 2505 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 P01737 135 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 RBX1P62877 108 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 THAP8Q8NA92 274 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 MLST8Q9BVC4 326 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 SNAI2O43623 268 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 Q9H3A6 140 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 GAL3ST2Q9H3Q3 398 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 RNF24Q9Y225 148 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 WASHC3Q9Y3C0 194 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 LRBAP50851 2863 aa12.1□□□□□ -0.47
MSH5-203ENST00000375750 SYS1-DBNDD2H3BUS1 97 aa12.09□□□□□ -0.47
MSH5-203ENST00000375750 TEX36Q5VZQ5 186 aa12.09□□□□□ -0.47
MSH5-203ENST00000375750 IGFBPL1Q8WX77 278 aa12.09□□□□□ -0.47
MSH5-203ENST00000375750 RNASE6Q93091 150 aaKnown RBP12.09□□□□□ -0.47
MSH5-203ENST00000375750 NUDT3O95989 172 aa12.09□□□□□ -0.47
MSH5-203ENST00000375750 ATP5IP56385 69 aaPredicted RBP12.09□□□□□ -0.47
MSH5-203ENST00000375750 FBLN7Q53RD9 439 aa12.09□□□□□ -0.47
MSH5-203ENST00000375750 PERPQ96FX8 193 aa12.09□□□□□ -0.47
MSH5-203ENST00000375750 IGHV1-69-2A0A0G2JMI3 117 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 CBY3A6NI87 242 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 LEPROTL1O95214 131 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 TOMM40O96008 361 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 TCTAP57738 103 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 VAMP3Q15836 100 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 PRNTQ86SH4 94 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 PRSS22Q9GZN4 317 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 TCRAP04437 139 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 CD3EP07766 207 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 GP9P14770 177 aa12.08□□□□□ -0.48
MSH5-203ENST00000375750 SUB1P53999 127 aaKnown RBP eCLIP12.08□□□□□ -0.482e-7■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms