RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 PRR20DP86480 221 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 PRR20BP86481 221 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 PRR20AP86496 221 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 GCSAMLQ5JQS6 135 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 C11orf71Q6IPW1 123 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 DEFB125Q8N687 156 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 BLNKQ8WV28 456 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 RNF5Q99942 180 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 VCX2Q9H322 139 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 SELENOKQ9Y6D0 94 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 BUB1B-PAK6H3BSN5 160 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 CD5LO43866 347 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 IGFBP2P18065 325 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 ZNF562Q6V9R5 426 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 LY6G5BQ8NDX9 201 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 C1orf159Q96HA4 380 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 UFC1Q9Y3C8 167 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 TSSC4Q9Y5U2 329 aaPredicted RBP6.62□□□□□ -1.35
UBR4-202ENST00000375224 TNFRSF18Q9Y5U5 241 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 ARL2-SNX15V9GYD0 113 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 ATRXP46100 2492 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 ANKHD1Q8IWZ3 2542 aaKnown RBP6.61□□□□□ -1.35
UBR4-202ENST00000375224 ACTL6BO94805 426 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 TYMSP04818 313 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 ARL14EPLP0DKL9 152 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 DIAPH2-AS1Q14236 149 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 CDSNQ15517 529 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 DTX2Q86UW9 622 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 FBXL7Q9UJT9 491 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 MUC21A0A0G2JKD1 596 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 MUC21A0A140T8X8 626 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 TAS2R45P59539 299 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 GAGE5Q13069 117 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 GAGE6Q13070 117 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 MUC21Q5SSG8 566 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 GATAD1Q8WUU5 269 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 RPEQ96AT9 228 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 NRN1Q9NPD7 142 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 TMEM167BQ9NRX6 74 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 MRPL16Q9NX20 251 aaKnown RBP6.61□□□□□ -1.35
UBR4-202ENST00000375224 IGF2RP11717 2491 aa6.61□□□□□ -1.35
UBR4-202ENST00000375224 TRAV8-6A0A0B4J262 113 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 IGHV1-3A0A0C4DH29 117 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 PGPEP1LA6NFU8 196 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 M0R1W7 72 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 LINC00869P0C866 280 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 SSBP2P81877 361 aaPredicted RBP6.6□□□□□ -1.35
UBR4-202ENST00000375224 LY6DQ14210 128 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 MOB3BQ86TA1 216 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 TECRQ9NZ01 308 aaKnown RBP6.6□□□□□ -1.35
UBR4-202ENST00000375224 DMXL2Q8TDJ6 3036 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 TNCP24821 2201 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 C7orf71A4D174 169 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 A4D1N5 150 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 NTF3P20783 257 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 GCHFRP30047 84 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 RPL23P62829 140 aaKnown RBP6.6□□□□□ -1.35
UBR4-202ENST00000375224 UHRF2Q96PU4 802 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 ONECUT1Q9UBC0 465 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 TRAV9-2A0A087WT02 112 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 SCGB2A1O75556 95 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 TSPAN13O95857 204 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 ADMP35318 185 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 RPL27AP46776 148 aaKnown RBP6.6□□□□□ -1.35
UBR4-202ENST00000375224 ATP5J2P56134 94 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 PQLC2Q6ZP29 291 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 MRPL32Q9BYC8 188 aaKnown RBP6.6□□□□□ -1.35
UBR4-202ENST00000375224 PSG8Q9UQ74 426 aa6.6□□□□□ -1.35
UBR4-202ENST00000375224 DEFA4P12838 97 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 FA2HQ7L5A8 372 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 OR2K2Q8NGT1 345 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 ATMQ13315 3056 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 MALRD1Q5VYJ5 2156 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 TMEM8BA6NDV4 472 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 COX7A1P24310 79 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 WT1-ASQ06250 92 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 PSG5Q15238 335 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 ZNF114Q8NC26 417 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 OR1L4Q8NGR5 311 aa6.59□□□□□ -1.35
UBR4-202ENST00000375224 SSBP3Q9BWW4 388 aaPredicted RBP6.59□□□□□ -1.35
UBR4-202ENST00000375224 B5MCH6 92 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 GPX1P07203 203 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 CRYGBP07316 175 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 AREGP15514 252 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 HTR1DP28221 377 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 RPL32P62910 135 aaKnown RBP6.59□□□□□ -1.36
UBR4-202ENST00000375224 OR11H6Q8NGC7 330 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 OR5A1Q8NGJ0 315 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 SRSF8Q9BRL6 282 aaKnown RBP6.59□□□□□ -1.36
UBR4-202ENST00000375224 ANAPC13Q9BS18 74 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 HSPB8Q9UJY1 196 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 SIGLEC9Q9Y336 463 aa6.59□□□□□ -1.36
UBR4-202ENST00000375224 IGHV3-72A0A0B4J1Y9 119 aa6.58□□□□□ -1.36
UBR4-202ENST00000375224 FAM231BA6NCW3 169 aa6.58□□□□□ -1.36
UBR4-202ENST00000375224 CGB1A6NKQ9 187 aa6.58□□□□□ -1.36
UBR4-202ENST00000375224 LY6LH3BQJ8 138 aa6.58□□□□□ -1.36
UBR4-202ENST00000375224 ATP5G3P48201 142 aa6.58□□□□□ -1.36
UBR4-202ENST00000375224 GNB1P62873 340 aa6.58□□□□□ -1.36
UBR4-202ENST00000375224 TNXAQ16473 311 aa6.58□□□□□ -1.36
UBR4-202ENST00000375224 BVES-AS1Q5T3Y7 98 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms