RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 IGKV1-17P01599 117 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 TCRAP04437 139 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 RAB4AP20338 218 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 GATA2P23769 480 aaPredicted RBP6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 ZFP36P26651 326 aaKnown RBP6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 CDKN1AP38936 164 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 CSN1S1P47710 185 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 RPL15P61313 204 aaKnown RBP6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 RELQ04864 619 aaPredicted RBP6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 SAPCD1Q5SSQ6 148 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 COX8CQ7Z4L0 72 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 FAM223AQ8IWN6 122 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 ZNF491Q8N8L2 437 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 OR5R1Q8NH85 324 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 C10orf105Q8TEF2 133 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 TSKUQ8WUA8 353 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 DAZAP1Q96EP5 407 aaKnown RBP6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 DERL1Q9BUN8 251 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 MLST8Q9BVC4 326 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 BPESC1Q9GZL8 116 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 ASPMQ8IZT6 3477 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 TRBV19A0A075B6N1 114 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 CENPVL3A0A0U1RRI6 287 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 XKRY2A2RUG3 117 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 PGPA6NDG6 321 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 B4DSR2 109 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 FCN1O00602 326 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 GATCO43716 136 aaKnown RBP6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 LTAP01374 205 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 SLC25A5P05141 298 aaKnown RBP6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 CNTFRP26992 372 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 FOXA3P55318 350 aaPredicted RBP6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 USF2Q15853 346 aaPredicted RBP6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 SAMD13Q5VXD3 122 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 ZNF600Q6ZNG1 722 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 Q8N9W7 124 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 AJUBAQ96IF1 538 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 FANCD2OSQ96PS1 177 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 TBX15Q96SF7 602 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 ZNF331Q9NQX6 463 aaPredicted RBP6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 HIF1ANQ9NWT6 349 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 MOB4Q9Y3A3 225 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 DMXL2Q8TDJ6 3036 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 TNCP24821 2201 aa6.88□□□□□ -1.31
SNRNP40-202ENST00000373720 BOD1L1Q8NFC6 3051 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 IGHV7-81A0A0B4J1V7 117 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 IGHV1-69DA0A0B4J2H0 117 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 TMEM89A2RUT3 159 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 ZNF705GA8MUZ8 300 aaPredicted RBP6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 K7EN84 100 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 IGLV2-8P01709 118 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 IGHV1-69P01742 117 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 AMY1AP04745 511 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 IGF1P05019 195 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 REG1AP05451 166 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 IGLC2P0DOY2 106 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 SAA4P35542 130 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 LYZP61626 148 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 SRSF2Q01130 221 aaKnown RBP6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 LHFPL4Q7Z7J7 247 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 EEF1AKMT3Q96AZ1 226 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 MRPL53Q96EL3 112 aaKnown RBP6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 USMG5Q96IX5 58 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 PRSS22Q9GZN4 317 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 Q9H3A6 140 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 RABAC1Q9UI14 185 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 DMRT1Q9Y5R6 373 aa6.87□□□□□ -1.31
SNRNP40-202ENST00000373720 CACNA1AO00555 2505 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 A0A087X0K7 114 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 A0A1W2PPR1 153 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 RBAKDNA6NC62 111 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 NPIPB6E9PJ23 425 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 IGHV4-39P01824 125 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 IL4P05112 153 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 JOSD1Q15040 202 aaPredicted RBP6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 Q56UQ5 140 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 LDLRAD2Q5SZI1 272 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 LRRC75A-AS1Q8N1F1 130 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 OR5T1Q8NG75 326 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 MBD6Q96DN6 1003 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 SLC50A1Q9BRV3 221 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 MRPL36Q9P0J6 103 aaKnown RBP6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 PKDREJQ9NTG1 2253 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 BSNQ9UPA5 3926 aa6.86□□□□□ -1.31
SNRNP40-202ENST00000373720 ROS1P08922 2347 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 IGF2RP11717 2491 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 SPTBN2O15020 2390 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 TRAV5A0A0B4J249 113 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 A0A0G2JLM5 398 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 LY6HO94772 140 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 P01737 135 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 MSMBP08118 114 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 CT45A10P0DMU9 189 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 PYYP10082 97 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 MGST1P10620 155 aaKnown RBP6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 CRISP2P16562 243 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 ATP5J2P56134 94 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 RPS20P60866 119 aaKnown RBP6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 IQCJQ1A5X6 159 aa6.85□□□□□ -1.31
SNRNP40-202ENST00000373720 OXLD1Q5BKU9 147 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms