RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 FAM223BA6NKX1 122 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 SCGB2A1O75556 95 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 GPR183P32249 361 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 RPL23P62829 140 aaKnown RBP13.62□□□□□ -0.23
SSBP3-203ENST00000371319 ATP5G2Q06055 141 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 USF2Q15853 346 aaPredicted RBP13.62□□□□□ -0.23
SSBP3-203ENST00000371319 FAM223AQ8IWN6 122 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 TMEM14CQ9P0S9 112 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 ZNF580Q9UK33 172 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 B4DEV8 164 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 H3BUA1 57 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 AP4M1O00189 453 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 CFHR3Q02985 330 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 KRTAP1-1Q07627 177 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 VPREB3Q9UKI3 123 aa13.62□□□□□ -0.23
SSBP3-203ENST00000371319 MAP1AP78559 2803 aaPredicted RBP13.61□□□□□ -0.23
SSBP3-203ENST00000371319 TRBV7-1A0A0A6YYK4 115 aa13.61□□□□□ -0.23
SSBP3-203ENST00000371319 TRGV3P03979 118 aa13.61□□□□□ -0.23
SSBP3-203ENST00000371319 ELOVL1Q9BW60 279 aa13.61□□□□□ -0.23
SSBP3-203ENST00000371319 TUBA4BQ9H853 241 aa13.61□□□□□ -0.23
SSBP3-203ENST00000371319 ZFHX3Q15911 3703 aa13.61□□□□□ -0.23
SSBP3-203ENST00000371319 CSPG4Q6UVK1 2322 aa13.6□□□□□ -0.23
SSBP3-203ENST00000371319 TSPAN4O14817 238 aa13.6□□□□□ -0.23
SSBP3-203ENST00000371319 CLEC3BP05452 202 aa13.6□□□□□ -0.23
SSBP3-203ENST00000371319 SNRPCP09234 159 aaKnown RBP13.6□□□□□ -0.23
SSBP3-203ENST00000371319 MYCNOSP40205 109 aa13.6□□□□□ -0.23
SSBP3-203ENST00000371319 SUMO1P63165 101 aaKnown RBP13.6□□□□□ -0.23
SSBP3-203ENST00000371319 CLEC19AQ6UXS0 136 aa13.6□□□□□ -0.23
SSBP3-203ENST00000371319 ZNF600Q6ZNG1 722 aa13.6□□□□□ -0.23
SSBP3-203ENST00000371319 ZNF329Q86UD4 541 aa13.6□□□□□ -0.23
SSBP3-203ENST00000371319 GAR1Q9NY12 217 aaKnown RBP13.6□□□□□ -0.23
SSBP3-203ENST00000371319 COLCA2A8K830 154 aa13.59□□□□□ -0.23
SSBP3-203ENST00000371319 NBEAP1P0C6P0 100 aa13.59□□□□□ -0.23
SSBP3-203ENST00000371319 CRYBB3P26998 211 aa13.59□□□□□ -0.23
SSBP3-203ENST00000371319 ADIRFQ15847 76 aa13.59□□□□□ -0.23
SSBP3-203ENST00000371319 IL17RELQ6ZVW7 336 aa13.59□□□□□ -0.23
SSBP3-203ENST00000371319 BLNKQ8WV28 456 aa13.59□□□□□ -0.23
SSBP3-203ENST00000371319 ATP6V0BQ99437 205 aa13.59□□□□□ -0.23
SSBP3-203ENST00000371319 TRBV20OR9-2A0A075B6H5 130 aa13.58□□□□□ -0.23
SSBP3-203ENST00000371319 MRPS12O15235 138 aaKnown RBP13.58□□□□□ -0.23
SSBP3-203ENST00000371319 HOXA3O43365 443 aaPredicted RBP13.58□□□□□ -0.23
SSBP3-203ENST00000371319 TGOLN2O43493 480 aa13.58□□□□□ -0.23
SSBP3-203ENST00000371319 IGLV1-40P01703 118 aa13.58□□□□□ -0.23
SSBP3-203ENST00000371319 TMEM95Q3KNT9 176 aa13.58□□□□□ -0.23
SSBP3-203ENST00000371319 C2CD4CQ8TF44 421 aa13.58□□□□□ -0.23
SSBP3-203ENST00000371319 YPEL4Q96NS1 127 aa13.58□□□□□ -0.23
SSBP3-203ENST00000371319 ZFAND3Q9H8U3 227 aa13.58□□□□□ -0.23
SSBP3-203ENST00000371319 ZANQ9Y493 2812 aa13.58□□□□□ -0.24
SSBP3-203ENST00000371319 ZNF98A6NK75 572 aa13.58□□□□□ -0.24
SSBP3-203ENST00000371319 TPPP2P59282 170 aa13.58□□□□□ -0.24
SSBP3-203ENST00000371319 TEX29Q8N6K0 151 aa13.58□□□□□ -0.24
SSBP3-203ENST00000371319 C15orf54Q8N8G6 183 aa13.58□□□□□ -0.24
SSBP3-203ENST00000371319 ISOC2Q96AB3 205 aa13.58□□□□□ -0.24
SSBP3-203ENST00000371319 ZNF586Q9NXT0 402 aa13.58□□□□□ -0.24
SSBP3-203ENST00000371319 H3BTX0 84 aa13.57□□□□□ -0.24
SSBP3-203ENST00000371319 CD5LO43866 347 aa13.57□□□□□ -0.24
SSBP3-203ENST00000371319 HIST1H1EP10412 219 aaKnown RBP13.57□□□□□ -0.24
SSBP3-203ENST00000371319 RNF212Q495C1 297 aa13.57□□□□□ -0.24
SSBP3-203ENST00000371319 TOMM20LQ6UXN7 152 aa13.57□□□□□ -0.24
SSBP3-203ENST00000371319 LINC01551Q86U37 167 aa13.57□□□□□ -0.24
SSBP3-203ENST00000371319 SIGLECL1Q8N7X8 197 aa13.57□□□□□ -0.24
SSBP3-203ENST00000371319 KLK15Q9H2R5 256 aa13.57□□□□□ -0.24
SSBP3-203ENST00000371319 GNB4Q9HAV0 340 aa13.57□□□□□ -0.24
SSBP3-203ENST00000371319 IGHV3-35A0A0C4DH35 117 aa13.56□□□□□ -0.24
SSBP3-203ENST00000371319 PGPEP1LA6NFU8 196 aa13.56□□□□□ -0.24
SSBP3-203ENST00000371319 C9JCJ5 164 aa13.56□□□□□ -0.24
SSBP3-203ENST00000371319 IGLC2P0DOY2 106 aa13.56□□□□□ -0.24
SSBP3-203ENST00000371319 RPL35P42766 123 aaKnown RBP13.56□□□□□ -0.24
SSBP3-203ENST00000371319 RANP62826 216 aaKnown RBP13.56□□□□□ -0.24
SSBP3-203ENST00000371319 S100A7AQ86SG5 101 aa13.56□□□□□ -0.24
SSBP3-203ENST00000371319 USMG5Q96IX5 58 aa13.56□□□□□ -0.24
SSBP3-203ENST00000371319 RABAC1Q9UI14 185 aa13.56□□□□□ -0.24
SSBP3-203ENST00000371319 PPP5D1E7EU14 171 aa13.55□□□□□ -0.24
SSBP3-203ENST00000371319 PF4V1P10720 104 aa13.55□□□□□ -0.24
SSBP3-203ENST00000371319 BPIFA4PQ86YQ2 179 aa13.55□□□□□ -0.24
SSBP3-203ENST00000371319 ZNF702PQ9H963 129 aa13.55□□□□□ -0.24
SSBP3-203ENST00000371319 ITPR3Q14573 2671 aa13.55□□□□□ -0.24
SSBP3-203ENST00000371319 BMPR1BO00238 502 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 OCC1Q8TAD7 63 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 HIST1H2BAQ96A08 127 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 TCEAL7Q9BRU2 100 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 CTDSP1Q9GZU7 261 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 Q9H3A6 140 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 TMEM242Q9NWH2 141 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 AURKAIP1Q9NWT8 199 aaPredicted RBP13.54□□□□□ -0.24
SSBP3-203ENST00000371319 TRBV19A0A075B6N1 114 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 IGHV3OR16-8A0A075B7F1 116 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.54□□□□□ -0.24
SSBP3-203ENST00000371319 CLPSL1A2RUU4 121 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 PGPA6NDG6 321 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 CXorf65A6NEN9 183 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 HELTA6NFD8 242 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 PEX7O00628 323 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 GNG5P63218 68 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 LCNL1Q6ZST4 164 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 PRSS22Q9GZN4 317 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 LY96Q9Y6Y9 160 aa13.54□□□□□ -0.24
SSBP3-203ENST00000371319 IGHG4P01861 327 aa13.53□□□□□ -0.24
SSBP3-203ENST00000371319 MT-ND4LP03901 98 aa13.53□□□□□ -0.24
SSBP3-203ENST00000371319 RAB9AP51151 201 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms