RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 LRTM1Q9HBL6 345 aa1.9□□□□□ -2.11
CNIH4-201ENST00000366856 LAMTOR3Q9UHA4 124 aa1.9□□□□□ -2.11
CNIH4-201ENST00000366856 RNF11Q9Y3C5 154 aa1.9□□□□□ -2.11
CNIH4-201ENST00000366856 NUBP2Q9Y5Y2 271 aa1.9□□□□□ -2.11
CNIH4-201ENST00000366856 RIMBP3CA6NJZ7 1639 aa1.9□□□□□ -2.11
CNIH4-201ENST00000366856 RIMBP3BA6NNM3 1639 aa1.9□□□□□ -2.11
CNIH4-201ENST00000366856 RIMBP3Q9UFD9 1639 aa1.9□□□□□ -2.11
CNIH4-201ENST00000366856 TOP2AP11388 1531 aaKnown RBP1.9□□□□□ -2.11
CNIH4-201ENST00000366856 HEATR5AQ86XA9 2040 aa1.9□□□□□ -2.11
CNIH4-201ENST00000366856 ECM29Q5VYK3 1845 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 H7BYZ3 331 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 HLA-EP13747 358 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 PLCXD2Q0VAA5 305 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
CNIH4-201ENST00000366856 CROCCP2Q86T23 111 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 IFT20Q8IY31 132 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 THEM6Q8WUY1 208 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 BORCS8Q96FH0 119 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 ADAT1Q9BUB4 502 aaKnown RBP1.89□□□□□ -2.11
CNIH4-201ENST00000366856 OTORQ9NRC9 128 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 GINS2Q9Y248 185 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 ASB4Q9Y574 426 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 DISP1Q96F81 1524 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 ICE1Q9Y2F5 2266 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 MYH11P35749 1972 aa1.89□□□□□ -2.11
CNIH4-201ENST00000366856 MPDZO75970 2070 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 MEIKINA0A087WXM9 373 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 K7ERJ3 54 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 UBL3O95164 117 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 BAALC-AS2P0C853 105 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 MIFP14174 115 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 RPL7P18124 248 aaKnown RBP1.88□□□□□ -2.11
CNIH4-201ENST00000366856 AKR1C3P42330 323 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 SSR2P43308 183 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 DEFB103AP81534 67 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 MYL5Q02045 173 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 ALX1Q15699 326 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 KRTAP13-4Q3LI77 160 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 COA5Q86WW8 74 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 SKA2Q8WVK7 121 aaPredicted RBP1.88□□□□□ -2.11
CNIH4-201ENST00000366856 HSPB11Q9Y547 144 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 TECPR2O15040 1411 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 CD109Q6YHK3 1445 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 GLI3P10071 1580 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 CCDC88AQ3V6T2 1871 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 ZFHX2Q9C0A1 2572 aaPredicted RBP1.88□□□□□ -2.11
CNIH4-201ENST00000366856 GOLGA3Q08378 1498 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 ARAP1Q96P48 1450 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 WDR97A6NE52 1622 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 KIF21BO75037 1637 aa1.88□□□□□ -2.11
CNIH4-201ENST00000366856 NCKAP5O14513 1909 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 TRDV1A0A1B0GX56 115 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 FUOMA2VDF0 154 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 A8MWV9 139 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 CRPP02741 224 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 S100A11P31949 105 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 HRCT1Q6UXD1 115 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 PATE2Q6UY27 113 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 FP248Q71RG6 208 aaPredicted RBP1.87□□□□□ -2.11
CNIH4-201ENST00000366856 PRR15Q8IV56 129 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 ISOC1Q96CN7 298 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 LRRIQ1Q96JM4 1722 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 Q96M85 177 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 CCDC115Q96NT0 180 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 BATF3Q9NR55 127 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 HS3ST2Q9Y278 367 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 CEP164Q9UPV0 1460 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 RAPGEF2Q9Y4G8 1499 aa1.87□□□□□ -2.11
CNIH4-201ENST00000366856 MAPKBP1O60336 1514 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 ARHGEF28Q8N1W1 1705 aaKnown RBP1.86□□□□□ -2.11
CNIH4-201ENST00000366856 GABARAPH6UMI1 98 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 BCL2P10415 239 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 POLR2HP52434 150 aaKnown RBP1.86□□□□□ -2.11
CNIH4-201ENST00000366856 HBBP68871 147 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 PHF5AQ7RTV0 110 aaKnown RBP1.86□□□□□ -2.11
CNIH4-201ENST00000366856 ANGPTL5Q86XS5 388 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 LINC00311Q8N616 119 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 LINC00301Q8NCQ3 95 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 OR9Q1Q8NGQ5 310 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 ZNF714Q96N38 554 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 C6orf62Q9GZU0 229 aaPredicted RBP1.86□□□□□ -2.11
CNIH4-201ENST00000366856 NAT8BQ9UHF3 227 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 LAMTOR2Q9Y2Q5 125 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 CFAP43Q8NDM7 1665 aa1.86□□□□□ -2.11
CNIH4-201ENST00000366856 NUMA1Q14980 2115 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 VWDEQ8N2E2 1590 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 PTPRBP23467 1997 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 CLIP1P30622 1438 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 C2orf70A6NJV1 201 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 LYZL6O75951 148 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 CST7O76096 145 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 PROSCO94903 275 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 ZNF705BP0CI00 300 aaPredicted RBP1.85□□□□□ -2.11
CNIH4-201ENST00000366856 RPS3P23396 243 aaKnown RBP eCLIP1.85□□□□□ -2.112e-6■■■□□ 17.7
CNIH4-201ENST00000366856 DEFB113Q30KQ7 82 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 PCOTHQ58A44 107 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 C12orf29Q8N999 325 aa1.85□□□□□ -2.11
CNIH4-201ENST00000366856 TMEM35BQ8NCS4 154 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms