RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 NKAIN1Q4KMZ8 207 aa-2.1□□□□□ -2.75
RNU6-238P-201ENST00000363313 Q5XG85 94 aa-2.1□□□□□ -2.75
RNU6-238P-201ENST00000363313 RPL22L1Q6P5R6 122 aaKnown RBP-2.1□□□□□ -2.75
RNU6-238P-201ENST00000363313 IMP4Q96G21 291 aaKnown RBP-2.1□□□□□ -2.75
RNU6-238P-201ENST00000363313 TIPINQ9BVW5 301 aa-2.1□□□□□ -2.75
RNU6-238P-201ENST00000363313 PRO0255Q9UI72 69 aa-2.1□□□□□ -2.75
RNU6-238P-201ENST00000363313 PLCE1Q9P212 2302 aa-2.1□□□□□ -2.75
RNU6-238P-201ENST00000363313 KIF27Q86VH2 1401 aa-2.1□□□□□ -2.75
RNU6-238P-201ENST00000363313 KIF15Q9NS87 1388 aa-2.1□□□□□ -2.75
RNU6-238P-201ENST00000363313 CCDC168Q8NDH2 2452 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 A0A0J9YY99 117 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 A0A1B0GW15 77 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 PSMD12O00232 456 aaPredicted RBP-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 CST4P01036 141 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 MPC1LP0DKB6 136 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 PPIBP23284 216 aaKnown RBP-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 AP2S1P53680 142 aaPredicted RBP-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 FABP9Q0Z7S8 132 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 EDDM3AQ14507 147 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 C1orf194Q5T5A4 169 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 LINC00299Q6ZSB3 139 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 BLIDQ8IZY5 108 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 OR5AS1Q8N127 324 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST3H2BBQ8N257 126 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 C5orf56Q8N8D9 126 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 DNAJC9Q8WXX5 260 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 H1FXQ92522 213 aaKnown RBP-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 CNFNQ9BYD5 112 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 HDHD2Q9H0R4 259 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 COL24A1Q17RW2 1714 aa-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 SIPA1L2Q9P2F8 1722 aaPredicted RBP-2.11□□□□□ -2.75
RNU6-238P-201ENST00000363313 TTC41PQ6P2S7 1318 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 SCN8AQ9UQD0 1980 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 MCRIP1C9JLW8 97 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 GADD45GO95257 159 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 PVALBP20472 110 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST1H2BOP23527 126 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST1H2BBP33778 126 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST1H2BDP58876 126 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST1H2BCP62807 126 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 FXYD3Q14802 87 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST2H2BEQ16778 126 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST2H2BFQ5QNW6 126 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 C8orf74Q6P047 294 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 FOXI2Q6ZQN5 318 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 GDPD1Q8N9F7 314 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST1H2BHQ93079 126 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST1H2BNQ99877 126 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 HIST1H2BMQ99879 126 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 PBOV1Q9GZY1 135 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 BCL2L10Q9HD36 194 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 C15orf41Q9Y2V0 281 aa-2.12□□□□□ -2.75
RNU6-238P-201ENST00000363313 USF3Q68DE3 2245 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 HELZP42694 1942 aaKnown RBP-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 A0A0C4DFX4 3053 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 DNAH9Q9NYC9 4486 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 TRPM7Q96QT4 1865 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 ARHGEF28Q8N1W1 1705 aaKnown RBP-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 NBDYA0A0U1RRE5 68 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 C7orf71A4D174 169 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 H0YIV9 168 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 HMMRO75330 724 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 BATFQ16520 125 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 OR13C4Q8NGS5 318 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 ASCL3Q9NQ33 180 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 TMEM14BQ9NUH8 114 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 TP73-AS1Q9UF72 201 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 ARHGEF11O15085 1522 aa-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 CDK13Q14004 1512 aaKnown RBP-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 DYNC1H1Q14204 4646 aaKnown RBP-2.13□□□□□ -2.75
RNU6-238P-201ENST00000363313 DNAH1Q9P2D7 4330 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 DNAH7Q8WXX0 4024 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 IGHV3-30P01768 117 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 IGHV3-33P01772 117 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 IGHV3-30-5P0DP03 117 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 CCL1P22362 96 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 RPS3P23396 243 aaKnown RBP eCLIP-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 FAM45BPQ6NSW5 357 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 CD200R1LQ6Q8B3 271 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 OR5D14Q8NGL3 314 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 RBP7Q96R05 134 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 UBAP1Q9NZ09 502 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 BZW2Q9Y6E2 419 aaKnown RBP-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 PXMP4Q9Y6I8 212 aa-2.14□□□□□ -2.75
RNU6-238P-201ENST00000363313 URB1O60287 2271 aaKnown RBP-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 TRBV20OR9-2A0A075B6H5 130 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 A0A0J9YY10 115 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 A0A1B0GX78 115 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 B4DSR2 109 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 BUB1B-PAK6H3BSN5 160 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 CCRL2O00421 344 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 FADS2O95864 444 aaKnown RBP-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 SNCBQ16143 134 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 HLA-DRB5Q30154 266 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 SPAG11AQ6PDA7 123 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 DEFB132Q7Z7B7 95 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 GGACTQ9BVM4 153 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 ERGIC3Q9Y282 383 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 IQSEC2Q5JU85 1478 aa-2.15□□□□□ -2.75
RNU6-238P-201ENST00000363313 APOBP04114 4563 aaKnown RBP-2.15□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms