RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 A0A1B0GWB2 263 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 C10orf55Q5SWW7 151 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 C18orf12Q96KH6 178 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 WDR83OSQ9Y284 106 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 PKIGQ9Y2B9 76 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 SIGLEC9Q9Y336 463 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 H0YJW9 148 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 RHODO00212 210 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 NDPQ00604 133 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 CRIPAKQ8N1N5 446 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 CD177Q8N6Q3 437 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 MAPK1IP1LQ8NDC0 245 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 ABCA1O95477 2261 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 SBF2Q86WG5 1849 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 A0A0U1RRA0 63 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 TMEM95Q3KNT9 176 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 IGKV1-9A0A0C4DH69 117 aa8.96□□□□□ -0.97
CLIP1-203ENST00000361654 TMEM238C9JI98 176 aa8.96□□□□□ -0.97
CLIP1-203ENST00000361654 IGKV2-40A0A087WW87 121 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-203ENST00000361654 IGKV2D-40P01614 121 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-203ENST00000361654 EFNB3Q15768 340 aa8.96□□□□□ -0.98
CLIP1-203ENST00000361654 SPOCK3Q9BQ16 436 aa8.96□□□□□ -0.98
CLIP1-203ENST00000361654 SUPT4H1P63272 117 aaKnown RBP8.96□□□□□ -0.98
CLIP1-203ENST00000361654 PRR30Q53SZ7 412 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-203ENST00000361654 SMPXQ9UHP9 88 aa8.96□□□□□ -0.98
CLIP1-203ENST00000361654 SELENOKQ9Y6D0 94 aa8.96□□□□□ -0.98
CLIP1-203ENST00000361654 GREB1LQ9C091 1923 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-203ENST00000361654 CKAP5Q14008 2032 aa8.96□□□□□ -0.98
CLIP1-203ENST00000361654 LY6HO94772 140 aa8.96□□□□□ -0.98
CLIP1-203ENST00000361654 LAMTOR3Q9UHA4 124 aa8.96□□□□□ -0.98
CLIP1-203ENST00000361654 LAGE3Q14657 143 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 PAQR4Q8N4S7 273 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-203ENST00000361654 PARD6GQ9BYG4 376 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-203ENST00000361654 SRSF4Q08170 494 aaKnown RBP8.95□□□□□ -0.98
CLIP1-203ENST00000361654 RUSC1-AS1Q66K80 236 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 RNF222A6NCQ9 220 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 M0R2P5 195 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 UBE2CO00762 179 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 LINC00614P0C842 121 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 LYPD1Q8N2G4 141 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 GATD1Q8NB37 220 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 IGHV2-70DA0A0C4DH43 119 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 A0A1B0GUS0 222 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 SRP19P09132 144 aaKnown RBP8.95□□□□□ -0.98
CLIP1-203ENST00000361654 ATP5L2Q7Z4Y8 100 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 ARID2Q68CP9 1835 aa8.95□□□□□ -0.98
CLIP1-203ENST00000361654 DICER1Q9UPY3 1922 aaKnown RBP8.94□□□□□ -0.98
CLIP1-203ENST00000361654 ATXN8Q156A1 80 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 KLF17Q5JT82 389 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-203ENST00000361654 NCOR1O75376 2440 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 TSKUQ8WUA8 353 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 RNASE7Q9H1E1 156 aaKnown RBP8.94□□□□□ -0.98
CLIP1-203ENST00000361654 WISP1O95388 367 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 SCRT1Q9BWW7 348 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 POLEQ07864 2286 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 EVI2AP22794 236 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 PSG3Q16557 428 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 ZNF562Q6V9R5 426 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 TMEM158Q8WZ71 300 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 XCL2Q9UBD3 114 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 CA1P00915 261 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-203ENST00000361654 ID3Q02535 119 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
CLIP1-203ENST00000361654 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-203ENST00000361654 EFNA2O43921 213 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 LYPD2Q6UXB3 125 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 NKAPP1Q8N9T2 125 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 IMMP2LQ96T52 175 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 TMEM126AQ9H061 195 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 THADAQ6YHU6 1953 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 DOCK3Q8IZD9 2030 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 IGKCP01834 107 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 IGHV4-39P01824 125 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 MESP1Q9BRJ9 268 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 PARP14Q460N5 1801 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 LRRC37AA6NMS7 1700 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 GAS1P54826 345 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 SLAQ13239 276 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 TMEM249Q2WGJ8 235 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 CD300EQ496F6 205 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-203ENST00000361654 EDA2RQ9HAV5 297 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 SDK2Q58EX2 2172 aa8.93□□□□□ -0.98
CLIP1-203ENST00000361654 FOXL1Q12952 345 aa8.92□□□□□ -0.98
CLIP1-203ENST00000361654 MYOFQ9NZM1 2061 aa8.92□□□□□ -0.98
CLIP1-203ENST00000361654 PGPEP1LA6NFU8 196 aa8.92□□□□□ -0.98
CLIP1-203ENST00000361654 LSM4Q9Y4Z0 139 aaKnown RBP8.92□□□□□ -0.98
CLIP1-203ENST00000361654 ELANEP08246 267 aa8.92□□□□□ -0.98
CLIP1-203ENST00000361654 CFHR2P36980 270 aa8.92□□□□□ -0.98
CLIP1-203ENST00000361654 TRAV13-1A0A0B4J241 112 aa8.92□□□□□ -0.98
CLIP1-203ENST00000361654 MYMXA0A1B0GTQ4 84 aa8.92□□□□□ -0.98
CLIP1-203ENST00000361654 TREML4Q6UXN2 200 aa8.92□□□□□ -0.98
CLIP1-203ENST00000361654 ZNF319Q9P2F9 582 aa8.92□□□□□ -0.98
CLIP1-203ENST00000361654 TRBV25-1A0A075B6N4 114 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 TNFRSF6BO95407 300 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 CD55P08174 381 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 LMO1P25800 156 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 HOXD3P31249 432 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-203ENST00000361654 IFI27L1Q96BM0 104 aa8.91□□□□□ -0.98
CLIP1-203ENST00000361654 ZNF646O15015 1829 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-203ENST00000361654 ALPK2Q86TB3 2170 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms