RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 SOD3P08294 240 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 RPL23P62829 140 aaKnown RBP12.62□□□□□ -0.39
PTPRO-202ENST00000348962 SRSF8Q9BRL6 282 aaKnown RBP12.62□□□□□ -0.39
PTPRO-202ENST00000348962 RHPN1-AS1Q9BWJ2 59 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 SRRM4A7MD48 611 aaKnown RBP12.62□□□□□ -0.39
PTPRO-202ENST00000348962 KIR3DL3Q8N743 410 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 LINC00477Q96M19 166 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 IMMP2LQ96T52 175 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 DAZ1Q9NQZ3 744 aaKnown RBP12.62□□□□□ -0.39
PTPRO-202ENST00000348962 MPDZO75970 2070 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 NYNRINQ9P2P1 1898 aaKnown RBP12.62□□□□□ -0.39
PTPRO-202ENST00000348962 IGHV1-69DA0A0B4J2H0 117 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 IGHV1-69P01742 117 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 MAPK1IP1LQ8NDC0 245 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 TRGV1A0A0A0MS02 117 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 C5orf63A6NC05 138 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 J3QLI3 93 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 ZNF138P52744 262 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 ARFGEF3Q5TH69 2177 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 BEND2Q8NDZ0 799 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 DPH3P1Q9H4G8 78 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 CARHSP1Q9Y2V2 147 aaKnown RBP12.61□□□□□ -0.39
PTPRO-202ENST00000348962 LDLRAD4O15165 306 aa12.61□□□□□ -0.39
PTPRO-202ENST00000348962 A0A087WWC5 75 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 TNFSF13O75888 250 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 SCRT1Q9BWW7 348 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 INSP01308 110 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 TRAV5A0A0B4J249 113 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 H0YIZ8 118 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 SLC25A20O43772 301 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 FCN3O75636 299 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 NDPQ00604 133 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 LY6G6FQ5SQ64 297 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 ZNF562Q6V9R5 426 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 CD28P10747 220 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 SELENOKQ9Y6D0 94 aa12.6□□□□□ -0.39
PTPRO-202ENST00000348962 IGKV3D-20A0A0C4DH25 116 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 OVOL3O00110 214 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 ITGB1BP1O14713 200 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 STAG3L3P0CL85 134 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 RFNGQ9Y644 331 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 TCF20Q9UGU0 1960 aaKnown RBP12.59□□□□□ -0.39
PTPRO-202ENST00000348962 GATA4P43694 442 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 SYNJ2BPP57105 145 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 ETV2O00321 342 aaPredicted RBP12.59□□□□□ -0.39
PTPRO-202ENST00000348962 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
PTPRO-202ENST00000348962 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
PTPRO-202ENST00000348962 BTCP35070 178 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 Q8TCH9 128 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 MBD3L1Q8WWY6 194 aa12.59□□□□□ -0.39
PTPRO-202ENST00000348962 TRAV3A0A0B4J244 114 aa12.58□□□□□ -0.39
PTPRO-202ENST00000348962 RUSC1-AS1Q66K80 236 aa12.58□□□□□ -0.39
PTPRO-202ENST00000348962 LINC00473A8K010 186 aa12.58□□□□□ -0.4
PTPRO-202ENST00000348962 IGKV1-5P01602 117 aa12.58□□□□□ -0.4
PTPRO-202ENST00000348962 PLP1P60201 277 aa12.58□□□□□ -0.4
PTPRO-202ENST00000348962 NUDT11Q96G61 164 aa12.58□□□□□ -0.4
PTPRO-202ENST00000348962 SMIM13P0DJ93 91 aa12.58□□□□□ -0.4
PTPRO-202ENST00000348962 Q6ZS49 121 aa12.58□□□□□ -0.4
PTPRO-202ENST00000348962 SCN8AQ9UQD0 1980 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 IGHV2-70DA0A0C4DH43 119 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 NDUFA3O95167 84 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
PTPRO-202ENST00000348962 PCNX2A6NKB5 2137 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 PSCAO43653 123 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 HBDP02042 147 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 TSKUQ8WUA8 353 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 OCC1Q8TAD7 63 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 UBE2E2Q96LR5 201 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 CLDN16Q9Y5I7 305 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 EXOC3-AS1Q8N2X6 119 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 TMEM86BQ8N661 226 aa12.57□□□□□ -0.4
PTPRO-202ENST00000348962 TRAV12-3A0A0B4J271 114 aa12.56□□□□□ -0.4
PTPRO-202ENST00000348962 ASCL4Q6XD76 172 aa12.56□□□□□ -0.4
PTPRO-202ENST00000348962 RNF182Q8N6D2 247 aa12.56□□□□□ -0.4
PTPRO-202ENST00000348962 IFITM2Q01629 132 aa12.56□□□□□ -0.4
PTPRO-202ENST00000348962 TMEM14EPQ6UXP3 125 aa12.56□□□□□ -0.4
PTPRO-202ENST00000348962 LYPD1Q8N2G4 141 aa12.56□□□□□ -0.4
PTPRO-202ENST00000348962 GFI1BQ5VTD9 330 aa12.56□□□□□ -0.4
PTPRO-202ENST00000348962 TOMM40O96008 361 aa12.55□□□□□ -0.4
PTPRO-202ENST00000348962 LCN12Q6JVE5 192 aa12.55□□□□□ -0.4
PTPRO-202ENST00000348962 SSBP4Q9BWG4 385 aaPredicted RBP12.55□□□□□ -0.4
PTPRO-202ENST00000348962 KIAA2026Q5HYC2 2103 aa12.55□□□□□ -0.4
PTPRO-202ENST00000348962 LOC102724200A0A096LPH7 203 aaPredicted RBP12.55□□□□□ -0.4
PTPRO-202ENST00000348962 TCRAP04437 139 aa12.55□□□□□ -0.4
PTPRO-202ENST00000348962 CFHR2P36980 270 aa12.55□□□□□ -0.4
PTPRO-202ENST00000348962 ZNF876PQ49A33 203 aa12.55□□□□□ -0.4
PTPRO-202ENST00000348962 TCF15Q12870 199 aa12.55□□□□□ -0.4
PTPRO-202ENST00000348962 REG4Q9BYZ8 158 aa12.55□□□□□ -0.4
PTPRO-202ENST00000348962 DEFB131AP59861 70 aa12.54□□□□□ -0.4
PTPRO-202ENST00000348962 FAM110DQ8TAY7 271 aaPredicted RBP12.54□□□□□ -0.4
PTPRO-202ENST00000348962 MCRIP2Q9BUT9 160 aaKnown RBP12.54□□□□□ -0.4
PTPRO-202ENST00000348962 PRDM13Q9H4Q3 707 aa12.54□□□□□ -0.4
PTPRO-202ENST00000348962 FAM215AQ9Y5M1 114 aa12.54□□□□□ -0.4
PTPRO-202ENST00000348962 LINC01619G3V211 115 aa12.54□□□□□ -0.4
PTPRO-202ENST00000348962 LHFPL4Q7Z7J7 247 aa12.54□□□□□ -0.4
PTPRO-202ENST00000348962 FAM19A2Q8N3H0 131 aa12.54□□□□□ -0.4
PTPRO-202ENST00000348962 PROK2Q9HC23 129 aa12.54□□□□□ -0.4
PTPRO-202ENST00000348962 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
PTPRO-202ENST00000348962 SUPT4H1P63272 117 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms