RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TIMM9Q9Y5J7 89 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 FREM3P0C091 2139 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 ALMS1Q8TCU4 4167 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 OR4C46A6NHA9 309 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 TEX22C9J3V5 150 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 RENP00797 406 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 HLA-DQA2P01906 255 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 F2RP25116 425 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 ZNF114Q8NC26 417 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 OR5D13Q8NGL4 314 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 OR10A2Q9H208 303 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 GCM1Q9NP62 436 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 SIGLEC8Q9NYZ4 499 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 MPC1Q9Y5U8 109 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 SPTA1P02549 2419 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 CTXND1A0A1B0GTU2 59 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 HIST1H1EP10412 219 aaKnown RBP5.85□□□□□ -1.47
ZNF540-202ENST00000343599 MYCNOSP40205 109 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 GNB1P62873 340 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 TMEM42Q69YG0 159 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 ADAMTSL5Q6ZMM2 481 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 GATAD1Q8WUU5 269 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 SPAG8Q99932 426 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-202ENST00000343599 TMEM70Q9BUB7 260 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 MTCH1Q9NZJ7 389 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 ANXA10Q9UJ72 324 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 F8P00451 2351 aa5.85□□□□□ -1.47
ZNF540-202ENST00000343599 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-202ENST00000343599 CD300LBA8K4G0 201 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 ODF3BA8MYP8 253 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 B5MCH6 92 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 ZNF878C9JN71 531 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 F8W1H4 67 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 BMPR1BO00238 502 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 CHST1O43916 411 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 CTXN1P60606 82 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 CEACAM16Q2WEN9 425 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 C5orf47Q569G3 176 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 ADAT3Q96EY9 351 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-202ENST00000343599 TMEM222Q9H0R3 208 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 CYSLTR1Q9Y271 337 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 ZNF257Q9Y2Q1 563 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 LINC00312Q9Y6C7 94 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 SPTBP11277 2137 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 C11orf94C9JXX5 98 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 H7C1C5 153 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 IGKV1D-33P01593 117 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 IGKV1-33P01594 117 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 IGLV3-1P01715 115 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 KLF5Q13887 457 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-202ENST00000343599 NMSQ5H8A3 153 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 GCSAMQ8N6F7 178 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 OR52N5Q8NH56 324 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 PP6455Q8WZ26 134 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 GGTLC1Q9BX51 225 aa5.84□□□□□ -1.47
ZNF540-202ENST00000343599 A0A087WX48 190 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 hADV38S2A0JD32 116 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 OR9G9P0C7N8 305 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 FRMD6-AS1P0C7T7 363 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 COX8AP10176 69 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 FABP2P12104 132 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 NTF3P20783 257 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 SRIP30626 198 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 RPEL1Q2QD12 228 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 PLCXD3Q63HM9 321 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 FAM57BQ71RH2 274 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 TPRX1Q8N7U7 411 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 MYOZ3Q8TDC0 251 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 KCNIP2Q9NS61 270 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 NAT8BQ9UHF3 227 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 UBE2J1Q9Y385 318 aaPredicted RBP5.83□□□□□ -1.48
ZNF540-202ENST00000343599 TRAV25A0A0B4J276 109 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 C3orf85A0A1B0GTC6 90 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 hDV102S1A0JD36 115 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 C17orf98A8MV24 154 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 OR3A4PP47883 348 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 RPL27P61353 136 aaKnown RBP5.83□□□□□ -1.48
ZNF540-202ENST00000343599 CX3CL1P78423 397 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 Q6ZS49 121 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 OR1F12Q8NHA8 337 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 ARFGEF3Q5TH69 2177 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 MGAQ8IWI9 3026 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 ARID1AO14497 2285 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 TRBV20OR9-2A0A075B6H5 130 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 M0R2Z0 102 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 HLA-DQA1P01909 254 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 SPINK8P0C7L1 97 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 COL8A2P25067 703 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 GRB2P62993 217 aaKnown RBP5.83□□□□□ -1.48
ZNF540-202ENST00000343599 EBI3Q14213 229 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 TNXAQ16473 311 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 PHLDA2Q53GA4 152 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 OR5AS1Q8N127 324 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 OR51E1Q8TCB6 317 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 LY96Q9Y6Y9 160 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 ARL2-SNX15V9GYD0 113 aa5.83□□□□□ -1.48
ZNF540-202ENST00000343599 A0A0U1RRA0 63 aa5.82□□□□□ -1.48
ZNF540-202ENST00000343599 ISLRO14498 428 aa5.82□□□□□ -1.48
ZNF540-202ENST00000343599 SNAI2O43623 268 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms