RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 APOBEC3AP31941 199 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-203ENST00000343508 SLC50A1Q9BRV3 221 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 CPAMD8Q8IZJ3 1885 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 SCGB1A1P11684 91 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 DLX4Q92988 240 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-203ENST00000343508 GTSF1LQ9H1H1 148 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 IGKV1-39P01597 117 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 IGKV1D-39P04432 117 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 MRPL20Q9BYC9 149 aaKnown RBP3.92□□□□□ -1.78
CSMD3-203ENST00000343508 CFHR1Q03591 330 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 K7EN84 100 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 ASIPP42127 132 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 KLF5Q13887 457 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-203ENST00000343508 ADIPOQQ15848 244 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF114Q8NC26 417 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 ABCA7Q8IZY2 2146 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 TRAV3A0A0B4J244 114 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 PMS2P5A8MQ11 134 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 J3KRW8 73 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 PRSS2P07478 247 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 KLF17Q5JT82 389 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-203ENST00000343508 DMRTC2Q8IXT2 367 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-203ENST00000343508 DCTN5Q9BTE1 182 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 B9A039 149 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 CDX4O14627 284 aaPredicted RBP3.91□□□□□ -1.78
CSMD3-203ENST00000343508 C10orf126Q8N4M7 172 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 SRSF8Q9BRL6 282 aaKnown RBP3.91□□□□□ -1.78
CSMD3-203ENST00000343508 RPUSD1Q9UJJ7 312 aaKnown RBP3.91□□□□□ -1.78
CSMD3-203ENST00000343508 H0YJW9 148 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 LOXL3P58215 753 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 FBXL15Q9H469 300 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 IGKV3-15P01624 115 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 ZFP36L1Q07352 338 aaKnown RBP3.91□□□□□ -1.78
CSMD3-203ENST00000343508 ECSCRQ19T08 205 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 C5orf24Q7Z6I8 188 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 ATP6V0BQ99437 205 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 EPOPA6NHQ4 379 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 C17orf100A8MU93 164 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 TDRG1Q3Y452 100 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 HAPLN4Q86UW8 402 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 PAX1P15863 534 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 WFDC3Q8IUB2 231 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 TRBV20-1A0A075B6N2 111 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 LOC105371242A0A075B767 164 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 TMEM133Q9H2Q1 129 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 DNAH14Q0VDD8 3507 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 ARHGAP21Q5T5U3 1957 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 NPIPB5A8MRT5 1133 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 IGKV1-16P04430 117 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 MAJINQ3KP22 176 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 Q5PR19 223 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 IGKV3-7A0A075B6H7 116 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 EXOC3-AS1Q8N2X6 119 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 NDUFA4L2Q9NRX3 87 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF492Q9P255 531 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 PSMB11A5LHX3 300 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 GGTLC3B5MD39 225 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 ZCCHC24Q8N2G6 241 aaKnown RBP3.91□□□□□ -1.78
CSMD3-203ENST00000343508 DEFB125Q8N687 156 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 DPM3Q9P2X0 92 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 NBR2O15453 112 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 SPACA3Q8IXA5 215 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 CHAC1Q9BUX1 264 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 C21orf62Q9NYP8 219 aa3.91□□□□□ -1.78
CSMD3-203ENST00000343508 NTN3O00634 580 aaPredicted RBP3.9□□□□□ -1.78
CSMD3-203ENST00000343508 IFI27P40305 119 aaPredicted RBP3.9□□□□□ -1.78
CSMD3-203ENST00000343508 FDCSPQ8NFU4 85 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 TMEM167AQ8TBQ9 72 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 LINC00479Q96M42 142 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF815PA8K554 130 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 H7C1H1 209 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 LINC00205P59089 165 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 M0R381 172 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF883P0CG24 379 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 LYZL1Q6UWQ5 148 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 FAM216BQ8N7L0 139 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 LRP4O75096 1905 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 KNL1Q8NG31 2342 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 WISP1O95388 367 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 EBLN2Q6P2I7 272 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 DEFB123Q8N688 67 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 KIR3DL3Q8N743 410 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 C11orf1Q9H5F2 150 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 RNASE2P10153 161 aaKnown RBP3.9□□□□□ -1.78
CSMD3-203ENST00000343508 ATP5G2Q06055 141 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 KRTAP27-1Q3LI81 207 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 METRNQ9UJH8 293 aa3.9□□□□□ -1.78
CSMD3-203ENST00000343508 TMEM200BQ69YZ2 307 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 GEMIN7Q9H840 131 aaKnown RBP3.9□□□□□ -1.79
CSMD3-203ENST00000343508 TRAV8-4A0A0B4J246 113 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 EVI2AP22794 236 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 ZNF56Q15929 161 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 BOD1L2Q8IYS8 172 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 SPRR3Q9UBC9 169 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 SNRPD3P62318 126 aaKnown RBP3.9□□□□□ -1.79
CSMD3-203ENST00000343508 MRAP2Q96G30 205 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 IGKV1D-17A0A075B6S4 117 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 TRAV21A0A0B4J279 112 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 PRSS46E5RG02 174 aa3.9□□□□□ -1.79
CSMD3-203ENST00000343508 DNAL4O96015 105 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms