RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 H0YIZ8 118 aa12.47□□□□□ -0.41
COL11A2-201ENST00000341947 ZNF362Q5T0B9 420 aaPredicted RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 LSM4Q9Y4Z0 139 aaKnown RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 A8MWV9 139 aa12.47□□□□□ -0.41
COL11A2-201ENST00000341947 MGST2Q99735 147 aa12.47□□□□□ -0.41
COL11A2-201ENST00000341947 XIRP1Q702N8 1843 aaKnown RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 IGKV1-27A0A075B6S5 117 aa12.46□□□□□ -0.41
COL11A2-201ENST00000341947 TCRAP04437 139 aa12.46□□□□□ -0.41
COL11A2-201ENST00000341947 SRSF3P84103 164 aaKnown RBP12.46□□□□□ -0.41
COL11A2-201ENST00000341947 VCYO14598 125 aa12.46□□□□□ -0.41
COL11A2-201ENST00000341947 ZNF329Q86UD4 541 aa12.46□□□□□ -0.41
COL11A2-201ENST00000341947 TMEM249Q2WGJ8 235 aa12.46□□□□□ -0.41
COL11A2-201ENST00000341947 LAMTOR3Q9UHA4 124 aa12.46□□□□□ -0.41
COL11A2-201ENST00000341947 HSD52Q0P140 79 aa12.46□□□□□ -0.42
COL11A2-201ENST00000341947 KLF17Q5JT82 389 aaPredicted RBP12.46□□□□□ -0.42
COL11A2-201ENST00000341947 SCN2AQ99250 2005 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 NDUFS8O00217 210 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 C6orf226Q5I0X4 101 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 LCN12Q6JVE5 192 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 GSN-AS1Q9NRJ2 163 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 PCP4P48539 62 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 PSG3Q16557 428 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 GFI1Q99684 422 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 BPESC1Q9GZL8 116 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 COL8A2P25067 703 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 ZNF479Q96JC4 524 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 RHPN1-AS1Q9BWJ2 59 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 TRAV3A0A0B4J244 114 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 SS18Q15532 418 aa12.45□□□□□ -0.42
COL11A2-201ENST00000341947 SIGLEC9Q9Y336 463 aa12.44□□□□□ -0.42
COL11A2-201ENST00000341947 ARID2Q68CP9 1835 aa12.44□□□□□ -0.42
COL11A2-201ENST00000341947 SP5Q6BEB4 398 aaPredicted RBP12.44□□□□□ -0.42
COL11A2-201ENST00000341947 MST1P26927 711 aa12.44□□□□□ -0.42
COL11A2-201ENST00000341947 TMEM155Q4W5P6 130 aa12.44□□□□□ -0.42
COL11A2-201ENST00000341947 ASXL3Q9C0F0 2248 aa12.44□□□□□ -0.42
COL11A2-201ENST00000341947 C17orf82Q86X59 251 aaPredicted RBP12.44□□□□□ -0.42
COL11A2-201ENST00000341947 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
COL11A2-201ENST00000341947 C1orf159Q96HA4 380 aa12.44□□□□□ -0.42
COL11A2-201ENST00000341947 CABIN1Q9Y6J0 2220 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 CSTL1Q9H114 145 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 MEGF9Q9H1U4 602 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 WNK3Q9BYP7 1800 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 LGALS1P09382 135 aaKnown RBP12.43□□□□□ -0.42
COL11A2-201ENST00000341947 RASL11AQ6T310 242 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 SAA4P35542 130 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 SUPT4H1P63272 117 aaKnown RBP12.43□□□□□ -0.42
COL11A2-201ENST00000341947 Q8TAT8 98 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 DAZ1Q9NQZ3 744 aaKnown RBP12.43□□□□□ -0.42
COL11A2-201ENST00000341947 SBF2Q86WG5 1849 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 TAF1LQ8IZX4 1826 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 INS-IGF2F8WCM5 200 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 Q6ZS92 163 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 APC2O95996 2303 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 FGF16O43320 207 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 ATRAIDQ6UW56 229 aa12.43□□□□□ -0.42
COL11A2-201ENST00000341947 RNF223E7ERA6 249 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 RALGAPA2Q2PPJ7 1873 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 LYPD1Q8N2G4 141 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 MYOFQ9NZM1 2061 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 SVILO95425 2214 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 DEFB130BP0DP73 79 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 DEFB130AP0DP74 79 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 MSRB2Q9Y3D2 182 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 HEATR5BQ9P2D3 2071 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 IGHG3P01860 377 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 GATA3P23771 443 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 LYPD2Q6UXB3 125 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 LEPROTO15243 131 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 TNFSF13O75888 250 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 SAMD5Q5TGI4 173 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 AGMATQ9BSE5 352 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 NEUROG3Q9Y4Z2 214 aa12.42□□□□□ -0.42
COL11A2-201ENST00000341947 CLPSP04118 112 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 CEACAM8P31997 349 aaPredicted RBP12.41□□□□□ -0.42
COL11A2-201ENST00000341947 SYNJ2BPP57105 145 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 SEC16AO15027 2179 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 C14orf178Q8N769 122 aaPredicted RBP12.41□□□□□ -0.42
COL11A2-201ENST00000341947 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 RFNGQ9Y644 331 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 Q5PR19 223 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 LHFPL1Q86WI0 220 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 CRIPAKQ8N1N5 446 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
COL11A2-201ENST00000341947 TMEM242Q9NWH2 141 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 IGKV1D-17A0A075B6S4 117 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST1H2BKO60814 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 IGKV1-5P01602 117 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST1H2BJP06899 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 MSMBP08118 114 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST1H2BOP23527 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST1H2BBP33778 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST1H2BDP58876 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST1H2BCP62807 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST2H2BEQ16778 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST1H2BHQ93079 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST1H2BNQ99877 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 HIST1H2BMQ99879 126 aa12.41□□□□□ -0.42
COL11A2-201ENST00000341947 IGFL4Q6B9Z1 124 aa12.4□□□□□ -0.42
COL11A2-201ENST00000341947 Q6P435 159 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms