RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 C2CD4CQ8TF44 421 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 DERL1Q9BUN8 251 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 CR1P17927 2039 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 RAB5AP20339 215 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 CRYBB3P26998 211 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 RPL35P42766 123 aaKnown RBP12.69□□□□□ -0.38
HPS1-202ENST00000338546 ELOBQ15370 118 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 LY6EQ16553 131 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 ZNF329Q86UD4 541 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 BPIFA4PQ86YQ2 179 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 ELOVL1Q9BW60 279 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 H7BYZ3 331 aa12.68□□□□□ -0.38
HPS1-202ENST00000338546 CRYBA1P05813 215 aa12.68□□□□□ -0.38
HPS1-202ENST00000338546 DEFB112Q30KQ8 113 aa12.68□□□□□ -0.38
HPS1-202ENST00000338546 ZNF600Q6ZNG1 722 aa12.68□□□□□ -0.38
HPS1-202ENST00000338546 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
HPS1-202ENST00000338546 SOX21Q9Y651 276 aaPredicted RBP12.68□□□□□ -0.38
HPS1-202ENST00000338546 BAHCC1Q9P281 2608 aa12.68□□□□□ -0.38
HPS1-202ENST00000338546 TRBV20OR9-2A0A075B6H5 130 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 OR2T8A6NH00 312 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 SH2D7A6NKC9 451 aaPredicted RBP12.67□□□□□ -0.38
HPS1-202ENST00000338546 AP4M1O00189 453 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 TGOLN2O43493 480 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 S100A9P06702 114 aaKnown RBP12.67□□□□□ -0.38
HPS1-202ENST00000338546 IER3P46695 156 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 FLI1Q01543 452 aaPredicted RBP12.67□□□□□ -0.38
HPS1-202ENST00000338546 ATP5G2Q06055 141 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 C1QL4Q86Z23 238 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 LYPD1Q8N2G4 141 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 PRDM13Q9H4Q3 707 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 CDC42EP3Q9UKI2 254 aa12.67□□□□□ -0.38
HPS1-202ENST00000338546 DOPEY2Q9Y3R5 2298 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 VPS13CQ709C8 3753 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 TRBV24-1A0A075B6N3 115 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 PPIFP30405 207 aaKnown RBP12.66□□□□□ -0.38
HPS1-202ENST00000338546 ADMP35318 185 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 SRP14P37108 136 aaKnown RBP12.66□□□□□ -0.38
HPS1-202ENST00000338546 GNG4P50150 75 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 RAB9AP51151 201 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 C9orf152Q5JTZ5 239 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 MAPK1IP1LQ8NDC0 245 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 OR4F17Q8NGA8 305 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 OCC1Q8TAD7 63 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 USMG5Q96IX5 58 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 OR5B12Q96R08 314 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 MLXQ9UH92 298 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 S4R3C0 116 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 POLQO75417 2590 aa12.66□□□□□ -0.38
HPS1-202ENST00000338546 BMPR1BO00238 502 aa12.65□□□□□ -0.38
HPS1-202ENST00000338546 CLEC3BP05452 202 aa12.65□□□□□ -0.38
HPS1-202ENST00000338546 S100PP25815 95 aa12.65□□□□□ -0.38
HPS1-202ENST00000338546 CNN1P51911 297 aaKnown RBP12.65□□□□□ -0.38
HPS1-202ENST00000338546 USF2Q15853 346 aaPredicted RBP12.65□□□□□ -0.38
HPS1-202ENST00000338546 C5orf17Q8NAS9 161 aa12.65□□□□□ -0.38
HPS1-202ENST00000338546 BTF3L4Q96K17 158 aa12.65□□□□□ -0.38
HPS1-202ENST00000338546 OTORQ9NRC9 128 aa12.65□□□□□ -0.38
HPS1-202ENST00000338546 EPDR1Q9UM22 224 aa12.65□□□□□ -0.38
HPS1-202ENST00000338546 LOC105371267A0A1B0GV96 52 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 MDFIC2A0A1B0GVS7 189 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 C1orf196B1AJZ1 125 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 PEX7O00628 323 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 PFN1P07737 140 aaKnown RBP12.64□□□□□ -0.39
HPS1-202ENST00000338546 RANP62826 216 aaKnown RBP12.64□□□□□ -0.39
HPS1-202ENST00000338546 RELQ04864 619 aaPredicted RBP12.64□□□□□ -0.39
HPS1-202ENST00000338546 PDE6HQ13956 83 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 Q6YL49 198 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 SMIM12Q96EX1 92 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 SFRP2Q96HF1 295 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 CHRDL1Q9BU40 450 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 RABAC1Q9UI14 185 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 ABCA12Q86UK0 2595 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 MRPS12O15235 138 aaKnown RBP12.64□□□□□ -0.39
HPS1-202ENST00000338546 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 RPL7P18124 248 aaKnown RBP12.64□□□□□ -0.39
HPS1-202ENST00000338546 GPR183P32249 361 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 RAB5BP61020 215 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 CENPWQ5EE01 88 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 LEMD1Q68G75 181 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 BCL6BQ8N143 479 aaPredicted RBP12.64□□□□□ -0.39
HPS1-202ENST00000338546 BLNKQ8WV28 456 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 CCDC140Q96MF4 163 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 PYGO2Q9BRQ0 406 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 ZNF586Q9NXT0 402 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 KLF12Q9Y4X4 402 aa12.64□□□□□ -0.39
HPS1-202ENST00000338546 CSPG4Q6UVK1 2322 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 CELSR2Q9HCU4 2923 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 TRBV19A0A075B6N1 114 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 TMEM89A2RUT3 159 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 PGPA6NDG6 321 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 IGHV3-23P01764 117 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 TRGV3P03979 118 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 GALR1P47211 349 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 BLCAPP62952 87 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 TMEM183BQ1AE95 376 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 TEX38Q6PEX7 206 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 KCNIP4Q6PIL6 250 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 IGF2BP2-AS1Q96M15 143 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 FOXC2Q99958 501 aa12.63□□□□□ -0.39
HPS1-202ENST00000338546 Q9H3A6 140 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms