RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 ST20Q9HBF5 79 aa12.83□□□□□ -0.36
HDAC5-202ENST00000336057 NXT2Q9NPJ8 142 aaKnown RBP12.83□□□□□ -0.36
HDAC5-202ENST00000336057 SIGLEC9Q9Y336 463 aa12.83□□□□□ -0.36
HDAC5-202ENST00000336057 TPTE2P1Q5T6R2 138 aa12.82□□□□□ -0.36
HDAC5-202ENST00000336057 KIR3DL3Q8N743 410 aa12.82□□□□□ -0.36
HDAC5-202ENST00000336057 TMEM14BQ9NUH8 114 aa12.82□□□□□ -0.36
HDAC5-202ENST00000336057 C19orf54Q5BKX5 351 aa12.82□□□□□ -0.36
HDAC5-202ENST00000336057 LYPD6Q86Y78 171 aa12.82□□□□□ -0.36
HDAC5-202ENST00000336057 RNF138Q8WVD3 245 aa12.82□□□□□ -0.36
HDAC5-202ENST00000336057 NPIPB5A8MRT5 1133 aa12.82□□□□□ -0.36
HDAC5-202ENST00000336057 RNASE4P34096 147 aaKnown RBP12.82□□□□□ -0.36
HDAC5-202ENST00000336057 PAX1P15863 534 aa12.82□□□□□ -0.36
HDAC5-202ENST00000336057 PRB4P10163 310 aaPredicted RBP12.81□□□□□ -0.36
HDAC5-202ENST00000336057 CD33P20138 364 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 CACNG7P62955 275 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 Q8NFD4 153 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 DOCK10Q96BY6 2186 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 PPIFP30405 207 aaKnown RBP12.81□□□□□ -0.36
HDAC5-202ENST00000336057 LYPD2Q6UXB3 125 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 ARL6IP6Q8N6S5 226 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 BUB1B-PAK6H3BSN5 160 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 CRXO43186 299 aaPredicted RBP12.81□□□□□ -0.36
HDAC5-202ENST00000336057 C3orf79P0CE67 100 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 MRPL27Q9P0M9 148 aaKnown RBP12.81□□□□□ -0.36
HDAC5-202ENST00000336057 RRN3P1Q2M238 152 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 LYPD6BQ8NI32 183 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 SSC4DQ8WTU2 575 aa12.81□□□□□ -0.36
HDAC5-202ENST00000336057 H7C1H1 209 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 IGHV2-5P01817 119 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 VDAC2P45880 294 aaPredicted RBP12.8□□□□□ -0.36
HDAC5-202ENST00000336057 NUTF2P61970 127 aaKnown RBP12.8□□□□□ -0.36
HDAC5-202ENST00000336057 HAPLN4Q86UW8 402 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 TEX29Q8N6K0 151 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 F2Z2F3 143 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 PRR31Q5SQ13 230 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 SPCS1Q9Y6A9 102 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 UBE2L6O14933 153 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 ALKBH7Q9BT30 221 aaPredicted RBP12.8□□□□□ -0.36
HDAC5-202ENST00000336057 GEMIN7Q9H840 131 aaKnown RBP12.8□□□□□ -0.36
HDAC5-202ENST00000336057 YLPM1P49750 1951 aaKnown RBP12.8□□□□□ -0.36
HDAC5-202ENST00000336057 KLF17Q5JT82 389 aaPredicted RBP12.8□□□□□ -0.36
HDAC5-202ENST00000336057 ZNF329Q86UD4 541 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 OR4X2Q8NGF9 303 aa12.8□□□□□ -0.36
HDAC5-202ENST00000336057 COL4A3Q01955 1670 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 IGKV2-40A0A087WW87 121 aaPredicted RBP12.79□□□□□ -0.36
HDAC5-202ENST00000336057 NDUFA3O95167 84 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 IGKV2D-40P01614 121 aaPredicted RBP12.79□□□□□ -0.36
HDAC5-202ENST00000336057 SMIM12Q96EX1 92 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 LINC00479Q96M42 142 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 KIAA1671Q9BY89 1806 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 NCOR1P1Q9H4R4 102 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
HDAC5-202ENST00000336057 ZNRD1Q9P1U0 126 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 A6NNC1 897 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 H3BUT2 72 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 GATA4P43694 442 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 CIRBPQ14011 172 aaKnown RBP12.79□□□□□ -0.36
HDAC5-202ENST00000336057 LCN12Q6JVE5 192 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 TRAV8-1A0A0A6YYK1 113 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 C5orf64Q2M2E5 130 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 SAMD13Q5VXD3 122 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 MS4A6AQ9H2W1 248 aa12.79□□□□□ -0.36
HDAC5-202ENST00000336057 KLRD1Q13241 179 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 C15orf32Q32M92 178 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 C2orf88Q9BSF0 95 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 ZNF256Q9Y2P7 627 aaPredicted RBP12.78□□□□□ -0.36
HDAC5-202ENST00000336057 TRAV21A0A0B4J279 112 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 OOSP1A8MZH6 123 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 DKK1O94907 266 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 RPL15P61313 204 aaKnown RBP12.78□□□□□ -0.36
HDAC5-202ENST00000336057 SRSF1Q07955 248 aaKnown RBP eCLIP12.78□□□□□ -0.36
HDAC5-202ENST00000336057 A0A1W2PPI3 338 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 TOMM40O96008 361 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 FBLN7Q53RD9 439 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 VMO1Q7Z5L0 202 aa12.78□□□□□ -0.36
HDAC5-202ENST00000336057 USF3Q68DE3 2245 aa12.77□□□□□ -0.36
HDAC5-202ENST00000336057 DPM2O94777 84 aa12.77□□□□□ -0.36
HDAC5-202ENST00000336057 Q0VG73 95 aa12.77□□□□□ -0.36
HDAC5-202ENST00000336057 D6R8Y8 96 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 TYMSP04818 313 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 TNFRSF18Q9Y5U5 241 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 C15orf65H3BRN8 121 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 PAX8Q06710 450 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 LYPD1Q8N2G4 141 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 GLMPQ8WWB7 406 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 EVI2AP22794 236 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 ZNF124Q15973 351 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 MINOS1Q5TGZ0 78 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 MINOS1-NBL1R4GNA1 71 aa12.77□□□□□ -0.37
HDAC5-202ENST00000336057 ABCA1O95477 2261 aa12.76□□□□□ -0.37
HDAC5-202ENST00000336057 NPFFO15130 113 aa12.76□□□□□ -0.37
HDAC5-202ENST00000336057 NDUFS6O75380 124 aaKnown RBP12.76□□□□□ -0.37
HDAC5-202ENST00000336057 CYYR1Q96J86 154 aa12.76□□□□□ -0.37
HDAC5-202ENST00000336057 C17orf58Q2M2W7 97 aa12.76□□□□□ -0.37
HDAC5-202ENST00000336057 NDUFA4L2Q9NRX3 87 aa12.76□□□□□ -0.37
HDAC5-202ENST00000336057 PSG3Q16557 428 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms