RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SIGLEC9Q9Y336 463 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 PKD1L2Q7Z442 2459 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 SHISA9B4DS77 424 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 E7EQL1 145 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 TOMM40O96008 361 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 IGLC2P0DOY2 106 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 IGLC3P0DOY3 106 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 CASP6P55212 293 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 LINC00322Q6ZN03 302 aaPredicted RBP12.27□□□□□ -0.45
BRCC3-201ENST00000330045 TCF24Q7RTU0 167 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 TNFRSF14Q92956 283 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 LPAR2Q9HBW0 351 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 INSIG2Q9Y5U4 225 aa12.27□□□□□ -0.45
BRCC3-201ENST00000330045 DCHS2Q6V1P9 2916 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 IGHV2-26A0A0B4J1V2 119 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 IGHV1-69-2A0A0G2JMI3 117 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 M0R2Z0 102 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 DLX1P56177 255 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 PLP1P60201 277 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 OR2D3Q8NGH3 330 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 PRSS22Q9GZN4 317 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 Q9H3A6 140 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 COL12A1Q99715 3063 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 A8MWL6 223 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 H3BTX0 84 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 DLEU1O43261 78 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 LTAP01374 205 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 RNASEKQ6P5S7 137 aaKnown RBP12.26□□□□□ -0.45
BRCC3-201ENST00000330045 NGBQ9NPG2 151 aa12.26□□□□□ -0.45
BRCC3-201ENST00000330045 FAM181BA6NEQ2 426 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 IGLV1-47P01700 117 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 P01737 135 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 TCRAP04437 139 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 HBBP68871 147 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 LY6DQ14210 128 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 PPP1R27Q86WC6 154 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 KLHDC1Q8N7A1 406 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 TXN2Q99757 166 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 GSX1Q9H4S2 264 aaPredicted RBP12.25□□□□□ -0.45
BRCC3-201ENST00000330045 F11RQ9Y624 299 aaKnown RBP12.25□□□□□ -0.45
BRCC3-201ENST00000330045 IGHV1-3A0A0C4DH29 117 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 PAX2Q02962 417 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 PRB3Q04118 309 aaPredicted RBP12.25□□□□□ -0.45
BRCC3-201ENST00000330045 MMDQ15546 238 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 CT83Q5H943 113 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 COL5A1-AS1Q5SY13 56 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 LCN12Q6JVE5 192 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 ATOH7Q8N100 152 aa12.25□□□□□ -0.45
BRCC3-201ENST00000330045 RALYQ9UKM9 306 aaKnown RBP12.25□□□□□ -0.45
BRCC3-201ENST00000330045 C19orf71A6NCJ1 209 aa12.24□□□□□ -0.45
BRCC3-201ENST00000330045 UCNP55089 124 aa12.24□□□□□ -0.45
BRCC3-201ENST00000330045 EBLN2Q6P2I7 272 aa12.24□□□□□ -0.45
BRCC3-201ENST00000330045 Q6ZN92 141 aa12.24□□□□□ -0.45
BRCC3-201ENST00000330045 ZNF492Q9P255 531 aa12.24□□□□□ -0.45
BRCC3-201ENST00000330045 HIGD1AQ9Y241 93 aa12.24□□□□□ -0.45
BRCC3-201ENST00000330045 TEX22C9J3V5 150 aa12.23□□□□□ -0.45
BRCC3-201ENST00000330045 GAGE1Q13065 139 aa12.23□□□□□ -0.45
BRCC3-201ENST00000330045 CDSNQ15517 529 aa12.23□□□□□ -0.45
BRCC3-201ENST00000330045 GTSF1Q8WW33 167 aa12.23□□□□□ -0.45
BRCC3-201ENST00000330045 DAZAP1Q96EP5 407 aaKnown RBP12.23□□□□□ -0.45
BRCC3-201ENST00000330045 BUB1B-PAK6H3BSN5 160 aa12.23□□□□□ -0.45
BRCC3-201ENST00000330045 PSG1P11464 419 aa12.23□□□□□ -0.45
BRCC3-201ENST00000330045 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
BRCC3-201ENST00000330045 HNRNPA3P51991 378 aaKnown RBP12.23□□□□□ -0.45
BRCC3-201ENST00000330045 LYZP61626 148 aa12.23□□□□□ -0.45
BRCC3-201ENST00000330045 OR8B3Q8NGG8 313 aa12.23□□□□□ -0.45
BRCC3-201ENST00000330045 RBM14Q96PK6 669 aaKnown RBP12.23□□□□□ -0.45
BRCC3-201ENST00000330045 OR8B2Q96RD0 313 aa12.23□□□□□ -0.45
BRCC3-201ENST00000330045 SOX21Q9Y651 276 aaPredicted RBP12.23□□□□□ -0.45
BRCC3-201ENST00000330045 GRNP28799 593 aaKnown RBP12.22□□□□□ -0.45
BRCC3-201ENST00000330045 APOBEC3AP31941 199 aaPredicted RBP12.22□□□□□ -0.45
BRCC3-201ENST00000330045 PRR31Q5SQ13 230 aa12.22□□□□□ -0.45
BRCC3-201ENST00000330045 PGLYRP4Q96LB8 373 aa12.22□□□□□ -0.45
BRCC3-201ENST00000330045 FBXL15Q9H469 300 aa12.22□□□□□ -0.45
BRCC3-201ENST00000330045 GOLT1BQ9Y3E0 138 aa12.22□□□□□ -0.45
BRCC3-201ENST00000330045 IGLC1P0CG04 106 aa12.22□□□□□ -0.45
BRCC3-201ENST00000330045 TFPI2P48307 235 aa12.22□□□□□ -0.45
BRCC3-201ENST00000330045 MAJINQ3KP22 176 aa12.22□□□□□ -0.45
BRCC3-201ENST00000330045 C2orf70A6NJV1 201 aa12.21□□□□□ -0.45
BRCC3-201ENST00000330045 Q56UQ5 140 aa12.21□□□□□ -0.45
BRCC3-201ENST00000330045 FAM162BQ5T6X4 162 aa12.21□□□□□ -0.45
BRCC3-201ENST00000330045 URB1-AS1Q96HZ7 61 aa12.21□□□□□ -0.45
BRCC3-201ENST00000330045 SLC25A39Q9BZJ4 359 aaPredicted RBP12.21□□□□□ -0.45
BRCC3-201ENST00000330045 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.45
BRCC3-201ENST00000330045 OTORQ9NRC9 128 aa12.21□□□□□ -0.45
BRCC3-201ENST00000330045 RBPMS2Q6ZRY4 209 aaKnown RBP12.21□□□□□ -0.45
BRCC3-201ENST00000330045 SRSF12Q8WXF0 261 aaKnown RBP12.21□□□□□ -0.45
BRCC3-201ENST00000330045 LAMTOR2Q9Y2Q5 125 aa12.21□□□□□ -0.45
BRCC3-201ENST00000330045 MALRD1Q5VYJ5 2156 aa12.21□□□□□ -0.46
BRCC3-201ENST00000330045 B9A039 149 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 LYNX1G3V0Z9 82 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 NPSP0C0P6 89 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 LYNX1P0DP58 116 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 FOXA3P55318 350 aaPredicted RBP12.2□□□□□ -0.46
BRCC3-201ENST00000330045 RPEQ96AT9 228 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 RASL11BQ9BPW5 248 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 TMEM14CQ9P0S9 112 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 TRAV9-2A0A087WT02 112 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms