RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 MLST8Q9BVC4 326 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 SIRPDQ9H106 197 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 UBTD1Q9HAC8 227 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 RPH3ALQ9UNE2 315 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 H3BTX0 84 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 EBI3Q14213 229 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 ASPHD1Q5U4P2 390 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 RASL11AQ6T310 242 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 ZNF562Q6V9R5 426 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 TMEM68Q96MH6 324 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 OTORQ9NRC9 128 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 ZNF586Q9NXT0 402 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 CHD8Q9HCK8 2581 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 NCOR2Q9Y618 2525 aa16.91■□□□□ 0.3
LIMS2-201ENST00000324938 SERF1AO75920 110 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 PAFAH1B2P68402 229 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 USF2Q15853 346 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-201ENST00000324938 IQCJQ1A5X6 159 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 FAM209BQ5JX69 171 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 PRR27Q6MZM9 219 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 WIPF2Q8TF74 440 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-201ENST00000324938 ITLN2Q8WWU7 325 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-201ENST00000324938 ARPC1AQ92747 370 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 SHANK2-AS3Q9BTD1 123 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 H3BRN7 92 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 LTAP01374 205 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 PAX1P15863 534 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 PRO1933Q9H354 126 aa16.9■□□□□ 0.3
LIMS2-201ENST00000324938 IGLV11-55A0A075B6I3 123 aa16.89■□□□□ 0.29
LIMS2-201ENST00000324938 EFNA4P52798 201 aa16.89■□□□□ 0.29
LIMS2-201ENST00000324938 TPPP2P59282 170 aa16.89■□□□□ 0.29
LIMS2-201ENST00000324938 RAB4BP61018 213 aa16.89■□□□□ 0.29
LIMS2-201ENST00000324938 BAGE3Q86Y29 109 aa16.89■□□□□ 0.29
LIMS2-201ENST00000324938 TMEM190Q8WZ59 177 aa16.89■□□□□ 0.29
LIMS2-201ENST00000324938 SGK494Q96LW2 274 aa16.89■□□□□ 0.29
LIMS2-201ENST00000324938 MS4A10Q96PG2 267 aa16.89■□□□□ 0.29
LIMS2-201ENST00000324938 FANCD2OSQ96PS1 177 aa16.89■□□□□ 0.29
LIMS2-201ENST00000324938 KLF17Q5JT82 389 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-201ENST00000324938 ZNF491Q8N8L2 437 aa16.88■□□□□ 0.29
LIMS2-201ENST00000324938 TSKUQ8WUA8 353 aa16.88■□□□□ 0.29
LIMS2-201ENST00000324938 ZNF48Q96MX3 618 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-201ENST00000324938 ZNF331Q9NQX6 463 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-201ENST00000324938 WNK2Q9Y3S1 2297 aa16.88■□□□□ 0.29
LIMS2-201ENST00000324938 NDPQ00604 133 aa16.88■□□□□ 0.29
LIMS2-201ENST00000324938 OR10J3Q5JRS4 329 aa16.88■□□□□ 0.29
LIMS2-201ENST00000324938 NUP35Q8NFH5 326 aa16.88■□□□□ 0.29
LIMS2-201ENST00000324938 RNF125Q96EQ8 232 aa16.88■□□□□ 0.29
LIMS2-201ENST00000324938 GNB4Q9HAV0 340 aa16.88■□□□□ 0.29
LIMS2-201ENST00000324938 TRAV30A0A087WSZ9 112 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 F2Z2F3 143 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 DDTP30046 118 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 DEFA6Q01524 100 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 TTC9CQ8N5M4 171 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 ZNF492Q9P255 531 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 IGHV2-70DA0A0C4DH43 119 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 NCBP2LA6PVI3 153 aaKnown RBP16.87■□□□□ 0.29
LIMS2-201ENST00000324938 BMPR1BO00238 502 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 UNQ6494/PRO21346Q6UXR6 183 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 BPIFA4PQ86YQ2 179 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 ZNF664Q8N3J9 261 aa16.87■□□□□ 0.29
LIMS2-201ENST00000324938 TBL2Q9Y4P3 447 aaKnown RBP16.87■□□□□ 0.29
LIMS2-201ENST00000324938 ITPR1Q14643 2758 aa16.86■□□□□ 0.29
LIMS2-201ENST00000324938 WI2-2373I1.2A0A1W2PRP0 233 aa16.86■□□□□ 0.29
LIMS2-201ENST00000324938 NEU1Q99519 415 aa16.86■□□□□ 0.29
LIMS2-201ENST00000324938 RNF24Q9Y225 148 aa16.86■□□□□ 0.29
LIMS2-201ENST00000324938 IL4P05112 153 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 TMEM11P17152 192 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 UQCRFS1P47985 274 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 KIAA1644Q3SXP7 199 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 Q86TA4 180 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 PRSS22Q9GZN4 317 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 GNG7O60262 68 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 APCSP02743 223 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 IGLC2P0DOY2 106 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 MFAP4P55083 255 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 CT83Q5H943 113 aa16.85■□□□□ 0.29
LIMS2-201ENST00000324938 RPP21Q9H633 154 aaKnown RBP16.85■□□□□ 0.29
LIMS2-201ENST00000324938 TRBV19A0A075B6N1 114 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 C19orf71A6NCJ1 209 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 HIGD1CA8MV81 97 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 LINC00322Q6ZN03 302 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-201ENST00000324938 EXOC3-AS1Q8N2X6 119 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 OR4F17Q8NGA8 305 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 NOL4LQ96MY1 436 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-201ENST00000324938 F8W735 103 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-201ENST00000324938 TOX4O94842 621 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 SCGB1D1O95968 90 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 SRIP30626 198 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 NAGKQ9UJ70 344 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 S4R3C0 116 aa16.84■□□□□ 0.29
LIMS2-201ENST00000324938 TRBV6-1A0A0K0K1D8 114 aa16.83■□□□□ 0.28
LIMS2-201ENST00000324938 C19orf84I3L1E1 186 aa16.83■□□□□ 0.28
LIMS2-201ENST00000324938 MRPS12O15235 138 aaKnown RBP16.83■□□□□ 0.28
LIMS2-201ENST00000324938 BRS3P32247 399 aa16.83■□□□□ 0.28
LIMS2-201ENST00000324938 UBE2E1P51965 193 aa16.83■□□□□ 0.28
LIMS2-201ENST00000324938 SLAQ13239 276 aa16.83■□□□□ 0.28
LIMS2-201ENST00000324938 Q6ZWC4 215 aa16.83■□□□□ 0.28
LIMS2-201ENST00000324938 ATP5L2Q7Z4Y8 100 aa16.83■□□□□ 0.28
LIMS2-201ENST00000324938 TBX15Q96SF7 602 aa16.83■□□□□ 0.28
LIMS2-201ENST00000324938 IGLV2-11P01706 119 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms