RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 SCO2A0A1W2PP80 73 aa7.31□□□□□ -1.24
CD28-201ENST00000324106 RBMY1BA6NDE4 496 aaKnown RBP7.31□□□□□ -1.24
CD28-201ENST00000324106 RBMY1EA6NEQ0 496 aaKnown RBP7.31□□□□□ -1.24
CD28-201ENST00000324106 SRRM4A7MD48 611 aaKnown RBP7.31□□□□□ -1.24
CD28-201ENST00000324106 ADARB2-AS1A8MUL3 147 aa7.31□□□□□ -1.24
CD28-201ENST00000324106 RBMY1DP0C7P1 496 aaKnown RBP7.31□□□□□ -1.24
CD28-201ENST00000324106 RBMY1A1P0DJD3 496 aaKnown RBP7.31□□□□□ -1.24
CD28-201ENST00000324106 RBMY1CP0DJD4 496 aa7.31□□□□□ -1.24
CD28-201ENST00000324106 SPOCK3Q9BQ16 436 aa7.31□□□□□ -1.24
CD28-201ENST00000324106 PRDM13Q9H4Q3 707 aa7.31□□□□□ -1.24
CD28-201ENST00000324106 NYNRINQ9P2P1 1898 aaKnown RBP7.3□□□□□ -1.24
CD28-201ENST00000324106 H3BVH4 76 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 SLC25A20O43772 301 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 SEC11AP67812 179 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 RARRES2Q99969 163 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 CLDN16Q9Y5I7 305 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 LINC00587B1AMM8 73 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 EREGO14944 169 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 SMIM6P0DI80 62 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 NUDT11Q96G61 164 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 SLC25A39Q9BZJ4 359 aaPredicted RBP7.3□□□□□ -1.24
CD28-201ENST00000324106 H7C2G1 150 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 NDUFB8O95169 186 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 LMO1P25800 156 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 EFNB1P98172 346 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 KIAA1644Q3SXP7 199 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 SLC25A34Q6PIV7 304 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 KAAG1Q9UBP8 84 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 KIAA2026Q5HYC2 2103 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 SOD3P08294 240 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 SUPT4H1P63272 117 aaKnown RBP7.3□□□□□ -1.24
CD28-201ENST00000324106 RUSC1-AS1Q66K80 236 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 ASCL4Q6XD76 172 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 SEPSECSQ9HD40 501 aaKnown RBP7.3□□□□□ -1.24
CD28-201ENST00000324106 OSTCQ9NRP0 149 aa7.3□□□□□ -1.24
CD28-201ENST00000324106 PMS2P5A8MQ11 134 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 FNDC10F2Z333 226 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 TRGC2P03986 189 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 FHITP49789 147 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 FOXA3P55318 350 aaPredicted RBP7.29□□□□□ -1.24
CD28-201ENST00000324106 MST1LQ2TV78 715 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 LHFPL1Q86WI0 220 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 LINC00311Q8N616 119 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 TMEM86BQ8N661 226 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 TICRRQ7Z2Z1 1910 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 TGIF2-C20orf24A0A0A6YYL0 155 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 IZUMO1RA6ND01 250 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 TOMM40O96008 361 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 RNASE1P07998 156 aaKnown RBP7.29□□□□□ -1.24
CD28-201ENST00000324106 ATP5G3P48201 142 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 TEX36Q5VZQ5 186 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 PROK2Q9HC23 129 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 USP34Q70CQ2 3546 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 A0A0A6YYD4 124 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 MPTX1A8MV57 137 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 FCN3O75636 299 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 PYYP10082 97 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 KLF17Q5JT82 389 aaPredicted RBP7.29□□□□□ -1.24
CD28-201ENST00000324106 KLHDC3Q9BQ90 382 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 DKK4Q9UBT3 224 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 TRAV8-6A0A0B4J262 113 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 F8VVB4 439 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 F8VWA3 439 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 SRSF1Q07955 248 aaKnown RBP eCLIP7.29□□□□□ -1.24
CD28-201ENST00000324106 TREML4Q6UXN2 200 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 Q71RC1 249 aaPredicted RBP7.29□□□□□ -1.24
CD28-201ENST00000324106 PRO1933Q9H354 126 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 TMEM160Q9NX00 188 aa7.29□□□□□ -1.24
CD28-201ENST00000324106 HIGD1CA8MV81 97 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 APOHP02749 345 aaPredicted RBP7.28□□□□□ -1.24
CD28-201ENST00000324106 TCTAP57738 103 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 DEFB131AP59861 70 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 RPL15P61313 204 aaKnown RBP7.28□□□□□ -1.24
CD28-201ENST00000324106 FAM90A2PQ658T7 463 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 GGTLC1Q9BX51 225 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 RHODO00212 210 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 MDKP21741 143 aaPredicted RBP7.28□□□□□ -1.24
CD28-201ENST00000324106 LINC01559Q495D7 138 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 NMSQ5H8A3 153 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 LDLRAD4O15165 306 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 ATP6V0E1O15342 81 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 LOXP28300 417 aaPredicted RBP7.28□□□□□ -1.24
CD28-201ENST00000324106 PDE6HQ13956 83 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 DAZAP2Q15038 168 aaPredicted RBP7.28□□□□□ -1.24
CD28-201ENST00000324106 BIVMQ86UB2 503 aa7.28□□□□□ -1.24
CD28-201ENST00000324106 PUSL1Q8N0Z8 303 aaKnown RBP7.28□□□□□ -1.24
CD28-201ENST00000324106 IGKV1D-8A0A087WSZ0 117 aa7.27□□□□□ -1.24
CD28-201ENST00000324106 GCSAMLQ5JQS6 135 aa7.27□□□□□ -1.24
CD28-201ENST00000324106 DNLZQ5SXM8 178 aa7.27□□□□□ -1.24
CD28-201ENST00000324106 VPREB3Q9UKI3 123 aa7.27□□□□□ -1.24
CD28-201ENST00000324106 SHANK1Q9Y566 2161 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 TRBV7-9A0A0J9YWB2 115 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 DAD1P61803 113 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 CD300CQ08708 224 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 TTC9CQ8N5M4 171 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 H3BUA1 57 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 FABP2P12104 132 aa7.27□□□□□ -1.25
CD28-201ENST00000324106 UQCR10Q9UDW1 63 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms