RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 CRIM1Q9NZV1 1036 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 PCNX1Q96RV3 2341 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 SELLP14151 372 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 TRPM7Q96QT4 1865 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 hDV102S1A0JD36 115 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 FBLN5Q9UBX5 448 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 COLCA2A8K830 154 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 CXCL1P09341 107 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 UBE2DNLQ8IWF7 75 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 SHANK3Q9BYB0 1731 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 CHCHD2Q9Y6H1 151 aaPredicted RBP10.08□□□□□ -0.8
FARP1-201ENST00000319562 NEGR1Q7Z3B1 354 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 NCKAP5O14513 1909 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 GVINP1Q7Z2Y8 2422 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 PSG3Q16557 428 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 C19orf48Q6RUI8 117 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 ID3Q02535 119 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 LINC00477Q96M19 166 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 FDCSPQ8NFU4 85 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
FARP1-201ENST00000319562 LY96Q9Y6Y9 160 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 ACACAQ13085 2346 aa10.08□□□□□ -0.8
FARP1-201ENST00000319562 DUTP33316 252 aaKnown RBP10.07□□□□□ -0.8
FARP1-201ENST00000319562 ZNF138P52744 262 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 EIF4EBP2Q13542 120 aaPredicted RBP10.07□□□□□ -0.8
FARP1-201ENST00000319562 LCTP09848 1927 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 TRACP01848 142 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 SS18Q15532 418 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 LAIR2Q6ISS4 152 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 NAA38Q9BRA0 125 aaKnown RBP10.07□□□□□ -0.8
FARP1-201ENST00000319562 NUP35Q8NFH5 326 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 SNHG12Q9BXW3 62 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 ATRXP46100 2492 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 MBNL3Q9NUK0 354 aaKnown RBP10.07□□□□□ -0.8
FARP1-201ENST00000319562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.07□□□□□ -0.82e-7■■■■□ 19.3
FARP1-201ENST00000319562 CACNA1GO43497 2377 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 SHISA3A0PJX4 238 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 PMS2P5A8MQ11 134 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 NCOR1P1Q9H4R4 102 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 WDR83OSQ9Y284 106 aa10.07□□□□□ -0.8
FARP1-201ENST00000319562 LY6G6FQ5SQ64 297 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 UBL5Q9BZL1 73 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 LSM4Q9Y4Z0 139 aaKnown RBP10.06□□□□□ -0.8
FARP1-201ENST00000319562 PSCAO43653 123 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 IFITM1P13164 125 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 DMRTC2Q8IXT2 367 aaPredicted RBP10.06□□□□□ -0.8
FARP1-201ENST00000319562 TRGV9Q99603 122 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 WDR81Q562E7 1941 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 IGKV2-40A0A087WW87 121 aaPredicted RBP10.06□□□□□ -0.8
FARP1-201ENST00000319562 GREM1O60565 184 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 IGKV2D-40P01614 121 aaPredicted RBP10.06□□□□□ -0.8
FARP1-201ENST00000319562 WNT2P09544 360 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 SPSB3Q6PJ21 355 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 CSTL1Q9H114 145 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 IGKV1D-13A0A0B4J2D9 117 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 IGKV1-13P0DP09 117 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 LINC01551Q86U37 167 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 PRIMA1Q86XR5 153 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 SPSB2Q99619 263 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 TRBV7-1A0A0A6YYK4 115 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 NCR2O95944 276 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 FAM27E3Q08E93 113 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 ZNF319Q9P2F9 582 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 IGHV1-2P23083 117 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 BTCP35070 178 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 C4orf51C9J302 202 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 FAM201AQ5SY85 155 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 LYZL1Q6UWQ5 148 aa10.06□□□□□ -0.8
FARP1-201ENST00000319562 TET1Q8NFU7 2136 aa10.05□□□□□ -0.8
FARP1-201ENST00000319562 LYPD1Q8N2G4 141 aa10.05□□□□□ -0.8
FARP1-201ENST00000319562 LY6G5BQ8NDX9 201 aa10.05□□□□□ -0.8
FARP1-201ENST00000319562 TREML4Q6UXN2 200 aa10.05□□□□□ -0.8
FARP1-201ENST00000319562 HAPLN4Q86UW8 402 aa10.05□□□□□ -0.8
FARP1-201ENST00000319562 TMEM158Q8WZ71 300 aa10.05□□□□□ -0.8
FARP1-201ENST00000319562 SRD5A1P18405 259 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 TMEM258P61165 79 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 ZNF474Q6S9Z5 364 aaPredicted RBP10.04□□□□□ -0.8
FARP1-201ENST00000319562 EXOC3-AS1Q8N2X6 119 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 SBF2Q86WG5 1849 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 SBF1O95248 1867 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 PKDREJQ9NTG1 2253 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 RFPL3SP0C7P2 107 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 CCL3L1P16619 93 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 PPP1R32Q7Z5V6 425 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 WBP1Q96G27 269 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 WFDC1Q9HC57 220 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 BRCA1P38398 1863 aaKnown RBP10.04□□□□□ -0.8
FARP1-201ENST00000319562 SRRM4A7MD48 611 aaKnown RBP10.04□□□□□ -0.8
FARP1-201ENST00000319562 TRGV1A0A0A0MS02 117 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 F8W1H4 67 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 C3orf79P0CE67 100 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 C1QTNF4Q9BXJ3 329 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 NHSL1Q5SYE7 1610 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 SCN10AQ9Y5Y9 1956 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 C15orf32Q32M92 178 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 UTF1Q5T230 341 aa10.04□□□□□ -0.8
FARP1-201ENST00000319562 LTBP4Q8N2S1 1624 aa10.03□□□□□ -0.8
FARP1-201ENST00000319562 TCRAP04437 139 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms