RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 HAPLN4Q86UW8 402 aa9.4□□□□□ -0.91
GCN1-201ENST00000300648 LINC00477Q96M19 166 aa9.4□□□□□ -0.91
GCN1-201ENST00000300648 KIR3DS1Q14943 382 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 OR13A1Q8NGR1 328 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 TDGF1P3P51864 188 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 SRSF2Q01130 221 aaKnown RBP9.39□□□□□ -0.91
GCN1-201ENST00000300648 IGLV3-12A0A075B6K2 115 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 CECR9P0C854 216 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 GPHA2Q96T91 129 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 HIST1H4AP62805 103 aaKnown RBP9.39□□□□□ -0.91
GCN1-201ENST00000300648 NEUROG3Q9Y4Z2 214 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 TRBV7-1A0A0A6YYK4 115 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 Q6ZS49 121 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 SLC25A45Q8N413 288 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 LEAP2Q969E1 77 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 TRBV6-6A0A0A6YYG2 114 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 ZIC3O60481 467 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 C9orf139Q6ZV77 190 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 GTSCR1Q86UQ5 136 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 LAMTOR3Q9UHA4 124 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 PPDPFLQ8WWR9 84 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 C1QTNF4Q9BXJ3 329 aa9.39□□□□□ -0.91
GCN1-201ENST00000300648 MRPL14Q6P1L8 145 aaKnown RBP9.38□□□□□ -0.91
GCN1-201ENST00000300648 C17orf100A8MU93 164 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 LYL1P12980 280 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 SRD5A1P18405 259 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 Q0VG73 95 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 SLC25A28Q96A46 364 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 SPSB2Q99619 263 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 TBX6O95947 436 aaPredicted RBP9.38□□□□□ -0.91
GCN1-201ENST00000300648 CSRP1P21291 193 aaKnown RBP9.38□□□□□ -0.91
GCN1-201ENST00000300648 C1orf43Q9BWL3 253 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 LDLRAD4O15165 306 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 FAM168AQ92567 244 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 ANKHD1Q8IWZ3 2542 aaKnown RBP9.38□□□□□ -0.91
GCN1-201ENST00000300648 SPINK2P20155 84 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
GCN1-201ENST00000300648 HCFC1P51610 2035 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 IL18BPO95998 194 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 TRACP01848 142 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 SELLP14151 372 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 CLEC19AQ6UXS0 136 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 SPG11Q96JI7 2443 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 IFITM1P13164 125 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 C1QL2Q7Z5L3 287 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 LHFPL1Q86WI0 220 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 LINC00158P58513 81 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 CACNA1AO00555 2505 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 D6R8Y8 96 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 GREM1O60565 184 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 TGFAP01135 160 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 OCIAD2Q56VL3 154 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 LINC01545Q5VT33 79 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 TMEM141Q96I45 108 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 PRR14LQ5THK1 2151 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 ARHGAP21Q5T5U3 1957 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 TMEM131Q92545 1883 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 RPL36AP83881 106 aaKnown RBP9.37□□□□□ -0.91
GCN1-201ENST00000300648 PAX8Q06710 450 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 RPL36ALQ969Q0 106 aaKnown RBP9.37□□□□□ -0.91
GCN1-201ENST00000300648 PRSS22Q9GZN4 317 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 RAMP3O60896 148 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 VDAC2P45880 294 aaPredicted RBP9.37□□□□□ -0.91
GCN1-201ENST00000300648 CRYBA2P53672 197 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 CFHR1Q03591 330 aa9.37□□□□□ -0.91
GCN1-201ENST00000300648 PLXNB3Q9ULL4 1909 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 TRGV4A0A0C4DH28 118 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 ZNF138P52744 262 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 MINOS1Q5TGZ0 78 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 TIMM21Q9BVV7 248 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 MINOS1-NBL1R4GNA1 71 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 PROB1E7EW31 1015 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 TTC28Q96AY4 2481 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 BSPH1Q075Z2 132 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 TMEM14EPQ6UXP3 125 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 SMAD7O15105 426 aaKnown RBP9.36□□□□□ -0.91
GCN1-201ENST00000300648 RBMY1FQ15415 496 aaKnown RBP9.36□□□□□ -0.91
GCN1-201ENST00000300648 IL17RELQ6ZVW7 336 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 GGTLC1Q9BX51 225 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 OR11H6Q8NGC7 330 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 SHISA3A0PJX4 238 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 LY6EQ16553 131 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 USMG5Q96IX5 58 aa9.36□□□□□ -0.91
GCN1-201ENST00000300648 PAX4O43316 350 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 LY6G5BQ8NDX9 201 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 MED13LQ71F56 2210 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 SOCS3O14543 225 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 ERCC8Q13216 396 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 A8MWP6 167 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 GNG5P63218 68 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 GATD1Q8NB37 220 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 MBNL3Q9NUK0 354 aaKnown RBP9.35□□□□□ -0.91
GCN1-201ENST00000300648 PLXNA2O75051 1894 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 NUP210Q8TEM1 1887 aaPredicted RBP9.35□□□□□ -0.91
GCN1-201ENST00000300648 RFNGQ9Y644 331 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 IGHV1-24A0A0C4DH33 117 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 IGKV3-20P01619 116 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 IGHV3-48P01763 117 aa9.35□□□□□ -0.91
GCN1-201ENST00000300648 PSG7Q13046 419 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms