RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 VSTM2AQ8TAG5 236 aa10.4□□□□□ -0.74
HERC6-202ENST00000273960 NEU4Q8WWR8 484 aaPredicted RBP10.4□□□□□ -0.74
HERC6-202ENST00000273960 SLC25A2Q9BXI2 301 aa10.4□□□□□ -0.74
HERC6-202ENST00000273960 MED13LQ71F56 2210 aa10.4□□□□□ -0.75
HERC6-202ENST00000273960 hADV38S2A0JD32 116 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 SP1P08047 785 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 HOXC12P31275 282 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 PRNTQ86SH4 94 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 TLN1Q9Y490 2541 aaKnown RBP10.39□□□□□ -0.75
HERC6-202ENST00000273960 TACC2O95359 2948 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 SPTBN4Q9H254 2564 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 C15orf61A6NNL5 157 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 WFDC2Q14508 124 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 ETDBQ3ZM63 59 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 C10orf113Q5VZT2 155 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 UFSP1Q6NVU6 142 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 ZNF329Q86UD4 541 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 HSD52Q0P140 79 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 CD177Q8N6Q3 437 aa10.39□□□□□ -0.75
HERC6-202ENST00000273960 COL5A1P20908 1838 aaPredicted RBP10.39□□□□□ -0.75
HERC6-202ENST00000273960 IFI27P40305 119 aaPredicted RBP10.38□□□□□ -0.75
HERC6-202ENST00000273960 RPP21Q9H633 154 aaKnown RBP10.38□□□□□ -0.75
HERC6-202ENST00000273960 NCOR2Q9Y618 2525 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 FTH1P19P0C7X4 201 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 CKS1BP61024 79 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 DUX4L9Q6RFH8 374 aaPredicted RBP10.38□□□□□ -0.75
HERC6-202ENST00000273960 PDPNQ86YL7 162 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 C19orf24Q9BVV8 132 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 NHP2Q9NX24 153 aaKnown RBP10.38□□□□□ -0.75
HERC6-202ENST00000273960 A0A1W2PPM0 123 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 WISP2O76076 250 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 PRDX2P32119 198 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 CFHR2P36980 270 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 RPS20P60866 119 aaKnown RBP10.38□□□□□ -0.75
HERC6-202ENST00000273960 SEC11AP67812 179 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 PET117Q6UWS5 81 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 LINC00305Q7Z4B0 112 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 OR2Z1Q8NG97 314 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 KLF14Q8TD94 323 aaPredicted RBP10.38□□□□□ -0.75
HERC6-202ENST00000273960 SRSF12Q8WXF0 261 aaKnown RBP10.38□□□□□ -0.75
HERC6-202ENST00000273960 ARPC1AQ92747 370 aa10.38□□□□□ -0.75
HERC6-202ENST00000273960 SLC25A10Q9UBX3 287 aaPredicted RBP10.38□□□□□ -0.75
HERC6-202ENST00000273960 SPENQ96T58 3664 aaKnown RBP10.37□□□□□ -0.75
HERC6-202ENST00000273960 SAA2P0DJI9 122 aaPredicted RBP10.37□□□□□ -0.75
HERC6-202ENST00000273960 WDR82Q6UXN9 313 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 FDCSPQ8NFU4 85 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 ZNF257Q9Y2Q1 563 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 TEX50A0A1B0GTY4 177 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 SMKR1H3BMG3 65 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 F2RL2O00254 374 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 ARMS2P0C7Q2 107 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 SRSF8Q9BRL6 282 aaKnown RBP10.37□□□□□ -0.75
HERC6-202ENST00000273960 ANKRD11Q6UB99 2663 aaPredicted RBP10.37□□□□□ -0.75
HERC6-202ENST00000273960 A0A1B0GV72 72 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 SRRM4A7MD48 611 aaKnown RBP10.37□□□□□ -0.75
HERC6-202ENST00000273960 DNPH1O43598 174 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 OR2J3O76001 311 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 RNFT1Q5M7Z0 435 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 HCP5Q6MZN7 132 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 FAM167A-AS1Q96KT0 104 aa10.37□□□□□ -0.75
HERC6-202ENST00000273960 CSMD1Q96PZ7 3565 aa10.36□□□□□ -0.75
HERC6-202ENST00000273960 H3BRM9 83 aa10.36□□□□□ -0.75
HERC6-202ENST00000273960 INSL3P51460 131 aa10.36□□□□□ -0.75
HERC6-202ENST00000273960 TMEM178AQ8NBL3 297 aa10.36□□□□□ -0.75
HERC6-202ENST00000273960 CHD8Q9HCK8 2581 aa10.36□□□□□ -0.75
HERC6-202ENST00000273960 GAGE12HA6NDE8 117 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 MGST3O14880 152 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 FXYD2P54710 66 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 TMPRSS3P57727 454 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 SCGB2A2Q13296 93 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 BCL6BQ8N143 479 aaPredicted RBP10.35□□□□□ -0.75
HERC6-202ENST00000273960 WIPF2Q8TF74 440 aaPredicted RBP10.35□□□□□ -0.75
HERC6-202ENST00000273960 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
HERC6-202ENST00000273960 ZNF747Q9BV97 191 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 IFI27L2Q9H2X8 130 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 E7EUB6 86 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 K7EQM0 130 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 FAM87AP0C7U9 286 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 PRB3Q04118 309 aaPredicted RBP10.35□□□□□ -0.75
HERC6-202ENST00000273960 GOLT1AQ6ZVE7 132 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 MRPL36Q9P0J6 103 aaKnown RBP10.35□□□□□ -0.75
HERC6-202ENST00000273960 EPDR1Q9UM22 224 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 AGRNO00468 2067 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 FNDC10F2Z333 226 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 H3BMG7 143 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 CSN1S1P47710 185 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 CT45A1Q5HYN5 189 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 NEGR1Q7Z3B1 354 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 EXOC3-AS1Q8N2X6 119 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 CT45A3Q8NHU0 189 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 ATP6V0BQ99437 205 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 MS4A6AQ9H2W1 248 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
HERC6-202ENST00000273960 A0A1B0GXF2 115 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 C15orf65H3BRN8 121 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 CRXO43186 299 aaPredicted RBP10.34□□□□□ -0.75
HERC6-202ENST00000273960 LTAP01374 205 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 CRYBA4P53673 196 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 INO80CQ6PI98 192 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms