RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 RNASE2P10153 161 aaKnown RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 GATA1P15976 413 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 IGFBP3P17936 291 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 AGMATQ9BSE5 352 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 DLL3Q9NYJ7 618 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 TAAR2Q9P1P5 351 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 AMMECR1Q9Y4X0 333 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 IGLL5B9A064 214 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 PAX4O43316 350 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 IGHMP01871 453 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 PRSS3P2Q8NHM4 247 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 RASL10AQ92737 203 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 CKAP5Q14008 2032 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 DMDP11532 3685 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 TRAV12-2A0A075B6T6 113 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 RBMY1BA6NDE4 496 aaKnown RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 RBMY1EA6NEQ0 496 aaKnown RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 RBMY1DP0C7P1 496 aaKnown RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 RBMY1A1P0DJD3 496 aaKnown RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 MRPS21P82921 87 aaKnown RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 AGPAT4-IT1Q9H0P7 198 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 GLIPR2Q9H4G4 154 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 BCL2L10Q9HD36 194 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 FNDC1Q4ZHG4 1894 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 C11orf94C9JXX5 98 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 TCF15Q12870 199 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 CIRBPQ14011 172 aaKnown RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 SLC48A1Q6P1K1 146 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 HDHD3Q9BSH5 251 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 PRR13Q9NZ81 148 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 ZNF581Q9P0T4 197 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 TMEM14AQ9Y6G1 99 aa7.25□□□□□ -1.25
CTDSPL-201ENST00000273179 COL6A3P12111 3177 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 PLAC8L1A1L4L8 177 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 HAX1O00165 279 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 SPRY3O43610 288 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 TIMM17BO60830 172 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 GYPBP06028 91 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 FAM90A2PQ658T7 463 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 TRAV1-1A0A0B4J248 108 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 PDCD6O75340 191 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 PPP1R3DO95685 299 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 ASAH2BP0C7U1 165 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 PCSK4Q6UW60 755 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 TMEM14EPQ6UXP3 125 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 TMEM99Q8N816 258 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 SPTSSAQ969W0 71 aa7.24□□□□□ -1.25
CTDSPL-201ENST00000273179 TRAV41A0A0B4J266 112 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 ZNF823P16415 610 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 HOXD3P31249 432 aaPredicted RBP7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 Q6ZQT7 251 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 NFAM1Q8NET5 270 aaPredicted RBP7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 FAM3DQ96BQ1 224 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 WDFY3Q8IZQ1 3526 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 ANKRD36A6QL64 1941 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 C12orf74Q32Q52 190 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 MPLKIPQ8TAP9 179 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 IL36BQ9NZH7 164 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 K7ESM1 405 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 M0R2P5 195 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 IGHG1P01857 330 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 GP1BBP13224 206 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 CACNA1DQ01668 2161 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 PLXNA3P51805 1871 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 KNL1Q8NG31 2342 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 FRYLO94915 3013 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 ETV2O00321 342 aaPredicted RBP7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 HLA-DRB4P13762 266 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 YPEL3P61236 119 aaPredicted RBP7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 RPL30P62888 115 aaKnown RBP7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 TWIST1Q15672 202 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 C12orf73Q69YU5 71 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 FAM19A1Q7Z5A9 133 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 IGF2BP2-AS1Q96M15 143 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 HLA-DRB4X5D2U9 266 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 WDFY4Q6ZS81 3184 aa7.23□□□□□ -1.25
CTDSPL-201ENST00000273179 COL4A4P53420 1690 aaPredicted RBP7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 FAM90A26D6RGX4 464 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 H3BT86 120 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 GCHFRP30047 84 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 OR5AS1Q8N127 324 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 SCRT2Q9NQ03 307 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 MTCL1Q9Y4B5 1905 aaKnown RBP7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 HMGN4O00479 90 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 SSSCA1O60232 199 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 CISD3P0C7P0 127 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 PSMG4Q5JS54 123 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 ZCCHC24Q8N2G6 241 aaKnown RBP7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 GTSF1Q8WW33 167 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 TMEM230Q96A57 120 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 H3BMM0 161 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 HMGA2P52926 109 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 SFTPA1Q8IWL2 248 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 UBE2WQ96B02 151 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 ELSPBP1Q96BH3 223 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 AJUBAQ96IF1 538 aa7.22□□□□□ -1.25
CTDSPL-201ENST00000273179 F2Z2F3 143 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms