RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 RPUSD1Q9UJJ7 312 aaKnown RBP6.46□□□□□ -1.38
USP3-201ENST00000268049 SMAD5-AS1Q9Y6J3 95 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 HEATR5BQ9P2D3 2071 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 SPTAN1Q13813 2472 aaKnown RBP6.46□□□□□ -1.38
USP3-201ENST00000268049 CDK2AP2O75956 126 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 MST1LQ2TV78 715 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 VPREB3Q9UKI3 123 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 DIDO1Q9BTC0 2240 aaKnown RBP6.46□□□□□ -1.38
USP3-201ENST00000268049 FANCMQ8IYD8 2048 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 TRBV20OR9-2A0A075B6H5 130 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 TRBV7-1A0A0A6YYK4 115 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 EGR4Q05215 589 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 CIARTQ8N365 385 aaPredicted RBP6.46□□□□□ -1.38
USP3-201ENST00000268049 LRTM2Q8N967 370 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 SLC25A2Q9BXI2 301 aa6.46□□□□□ -1.38
USP3-201ENST00000268049 ESPL1Q14674 2120 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 BTCP35070 178 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 KIR3DL3Q8N743 410 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 OR5AN1Q8NGI8 311 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 WFDC6Q9BQY6 131 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 DOCK9Q9BZ29 2069 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 TRBV5-7A0A0A0MS05 114 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 PIN1P1O15428 100 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 SELLP14151 372 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 RNF183Q96D59 192 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 C19orf24Q9BVV8 132 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 MUC21A0A0G2JKD1 596 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 MUC21A0A140T8X8 626 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 PGLYRP1O75594 196 aaPredicted RBP6.45□□□□□ -1.38
USP3-201ENST00000268049 MUC21Q5SSG8 566 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 C20orf144Q9BQM9 153 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 C1QTNF5Q9BXJ0 243 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 A0A1B0GTI1 187 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 SCO2A0A1W2PP80 73 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 KIR3DS1Q14943 382 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 NABP1Q96AH0 204 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 GNB1LQ9BYB4 327 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 SS18L2Q9UHA2 77 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 KLF12Q9Y4X4 402 aa6.45□□□□□ -1.38
USP3-201ENST00000268049 CGB1A6NKQ9 187 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 PLAUP00749 431 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 PSG3Q16557 428 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 EPDR1Q9UM22 224 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 DNAJC13O75165 2243 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 A0A087X0K7 114 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 TRAV12-3A0A0B4J271 114 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 NDUFA3O95167 84 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 CCL18P55774 89 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 FGFRL1Q8N441 504 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 IGHV2-26A0A0B4J1V2 119 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 INSL3P51460 131 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 TMEM219Q86XT9 240 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 BCL6BQ8N143 479 aaPredicted RBP6.44□□□□□ -1.38
USP3-201ENST00000268049 KIR2DL4Q99706 377 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 TRAV2A0A0B4J234 112 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 A0A1B0GUT8 65 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 AZU1P20160 251 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 SAA4P35542 130 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 ATP5G3P48201 142 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 SLAQ13239 276 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 TMEM42Q69YG0 159 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 MYO7BQ6PIF6 2116 aa6.44□□□□□ -1.38
USP3-201ENST00000268049 CHCHD1Q96BP2 118 aaKnown RBP6.44□□□□□ -1.38
USP3-201ENST00000268049 MRPL32Q9BYC8 188 aaKnown RBP6.44□□□□□ -1.38
USP3-201ENST00000268049 SHISA3A0PJX4 238 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 F5H768 121 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 PVRIGQ6DKI7 326 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 TMEM144Q7Z5S9 345 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 SCGB3A1Q96QR1 104 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 PTPRSQ13332 1948 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 TRAV21A0A0B4J279 112 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 DPM2O94777 84 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 MYCNOSP40205 109 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 CACNG7P62955 275 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 ATXN8Q156A1 80 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 RCHY1Q96PM5 261 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 POLR3KQ9Y2Y1 108 aaPredicted RBP6.43□□□□□ -1.38
USP3-201ENST00000268049 INTS1Q8N201 2190 aaKnown RBP6.43□□□□□ -1.38
USP3-201ENST00000268049 C9JCJ5 164 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 EVI2AP22794 236 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 CFHR2P36980 270 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 ZNF474Q6S9Z5 364 aaPredicted RBP6.43□□□□□ -1.38
USP3-201ENST00000268049 RNF126Q9BV68 326 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 NPCDR1Q9BY65 106 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 RPP21Q9H633 154 aaKnown RBP6.43□□□□□ -1.38
USP3-201ENST00000268049 CCDC88CQ9P219 2028 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.43□□□□□ -1.38
USP3-201ENST00000268049 C1orf122Q6ZSJ8 110 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 TMEM256Q8N2U0 113 aa6.43□□□□□ -1.38
USP3-201ENST00000268049 IGLV1-36A0A0B4J1U3 117 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 C15orf61A6NNL5 157 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 HBDP02042 147 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 COL8A2P25067 703 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 ACTL10Q5JWF8 245 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 LY6G6FQ5SQ64 297 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 FAM201AQ5SY85 155 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 FAM74A4Q5TZK3 123 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 VKORC1L1Q8N0U8 176 aa6.42□□□□□ -1.38
USP3-201ENST00000268049 C1orf43Q9BWL3 253 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms