RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TCL1AP56279 114 aa12.77□□□□□ -0.37
UBE3D-201ENST00000237186 RAB4BP61018 213 aa12.77□□□□□ -0.37
UBE3D-201ENST00000237186 FBLN7Q53RD9 439 aa12.77□□□□□ -0.37
UBE3D-201ENST00000237186 LEMD1Q68G75 181 aa12.77□□□□□ -0.37
UBE3D-201ENST00000237186 TTC9CQ8N5M4 171 aa12.77□□□□□ -0.37
UBE3D-201ENST00000237186 FANCD2OSQ96PS1 177 aa12.77□□□□□ -0.37
UBE3D-201ENST00000237186 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.37
UBE3D-201ENST00000237186 IGLV11-55A0A075B6I3 123 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 GNLYP22749 145 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 CD24P25063 80 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 EFNA4P52798 201 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 HES1Q14469 280 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 OR10J3Q5JRS4 329 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 ASPHD1Q5U4P2 390 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 DYNAPQ8N1N2 210 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 ZNF491Q8N8L2 437 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 TSKUQ8WUA8 353 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 PRSS22Q9GZN4 317 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 SIRPDQ9H106 197 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 ZNF586Q9NXT0 402 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 WI2-2373I1.2A0A1W2PRP0 233 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 H3BRN7 92 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 CA1P00915 261 aaPredicted RBP12.76□□□□□ -0.37
UBE3D-201ENST00000237186 CDKN1AP38936 164 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 CT83Q5H943 113 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 NUP35Q8NFH5 326 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 MS4A10Q96PG2 267 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 FAM103A1Q9BTL3 118 aaKnown RBP12.76□□□□□ -0.37
UBE3D-201ENST00000237186 ZNF331Q9NQX6 463 aaPredicted RBP12.76□□□□□ -0.37
UBE3D-201ENST00000237186 ZNF492Q9P255 531 aa12.76□□□□□ -0.37
UBE3D-201ENST00000237186 ACACBO00763 2458 aa12.75□□□□□ -0.37
UBE3D-201ENST00000237186 TRBV6-1A0A0K0K1D8 114 aa12.75□□□□□ -0.37
UBE3D-201ENST00000237186 SPINK4O60575 86 aa12.75□□□□□ -0.37
UBE3D-201ENST00000237186 SERF1AO75920 110 aa12.75□□□□□ -0.37
UBE3D-201ENST00000237186 TPPP2P59282 170 aa12.75□□□□□ -0.37
UBE3D-201ENST00000237186 SLC35B1P78383 322 aa12.75□□□□□ -0.37
UBE3D-201ENST00000237186 USF2Q15853 346 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-201ENST00000237186 ZNF664Q8N3J9 261 aa12.75□□□□□ -0.37
UBE3D-201ENST00000237186 ITLN2Q8WWU7 325 aaPredicted RBP12.75□□□□□ -0.37
UBE3D-201ENST00000237186 ARPC1AQ92747 370 aa12.75□□□□□ -0.37
UBE3D-201ENST00000237186 TBL2Q9Y4P3 447 aaKnown RBP12.75□□□□□ -0.37
UBE3D-201ENST00000237186 HIVEP3Q5T1R4 2406 aa12.75□□□□□ -0.37
UBE3D-201ENST00000237186 NDUFS7O75251 213 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 DDTP30046 118 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 MRPL54Q6P161 138 aaKnown RBP12.74□□□□□ -0.37
UBE3D-201ENST00000237186 BAGE3Q86Y29 109 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 BPIFA4PQ86YQ2 179 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 LYPD1Q8N2G4 141 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 NOL4LQ96MY1 436 aaPredicted RBP12.74□□□□□ -0.37
UBE3D-201ENST00000237186 LRBAP50851 2863 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 IGHV2-70DA0A0C4DH43 119 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 A0A1W2PRD5 423 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 A0A1W2PRF3 423 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 A0A1W2PRM7 423 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 C19orf71A6NCJ1 209 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 BMPR1BO00238 502 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 IGLC2P0DOY2 106 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 DEFA6Q01524 100 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 FAM209BQ5JX69 171 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 ATP5L2Q7Z4Y8 100 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 S100A7AQ86SG5 101 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 RNF125Q96EQ8 232 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 GNB4Q9HAV0 340 aa12.74□□□□□ -0.37
UBE3D-201ENST00000237186 HRNRQ86YZ3 2850 aaPredicted RBP12.73□□□□□ -0.37
UBE3D-201ENST00000237186 DCHS2Q6V1P9 2916 aa12.73□□□□□ -0.37
UBE3D-201ENST00000237186 TRBV19A0A075B6N1 114 aa12.73□□□□□ -0.37
UBE3D-201ENST00000237186 MRPS12O15235 138 aaKnown RBP12.73□□□□□ -0.37
UBE3D-201ENST00000237186 UBE2E1P51965 193 aa12.73□□□□□ -0.37
UBE3D-201ENST00000237186 MFAP4P55083 255 aa12.73□□□□□ -0.37
UBE3D-201ENST00000237186 NDPQ00604 133 aa12.73□□□□□ -0.37
UBE3D-201ENST00000237186 IGFBPL1Q8WX77 278 aa12.73□□□□□ -0.37
UBE3D-201ENST00000237186 NEU1Q99519 415 aa12.73□□□□□ -0.37
UBE3D-201ENST00000237186 ABCA1O95477 2261 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 APCSP02743 223 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 KLF17Q5JT82 389 aaPredicted RBP12.72□□□□□ -0.37
UBE3D-201ENST00000237186 PRR27Q6MZM9 219 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 PRO1933Q9H354 126 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 FAM231BA6NCW3 169 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 NCBP2LA6PVI3 153 aaKnown RBP12.72□□□□□ -0.37
UBE3D-201ENST00000237186 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 A8MWP6 167 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 F8W735 103 aaPredicted RBP12.72□□□□□ -0.37
UBE3D-201ENST00000237186 H3BTX0 84 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 IGLV2-11P01706 119 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 BRS3P32247 399 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 KLK9Q2XQG4 91 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 LINC00322Q6ZN03 302 aaPredicted RBP12.72□□□□□ -0.37
UBE3D-201ENST00000237186 REC114Q7Z4M0 266 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 OR4F17Q8NGA8 305 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 AJUBAQ96IF1 538 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 SGK494Q96LW2 274 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 GFRA4Q9GZZ7 299 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 UBTD1Q9HAC8 227 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 THYN1Q9P016 225 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 KLK9Q9UKQ9 250 aa12.72□□□□□ -0.37
UBE3D-201ENST00000237186 A0A1B0GXF2 115 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 NPIPB6E9PJ23 425 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 F2Z2F3 143 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 GNG7O60262 68 aa12.71□□□□□ -0.37
UBE3D-201ENST00000237186 IL4P05112 153 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms