RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 DTX2Q86UW9 622 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 PRSS22Q9GZN4 317 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 ZNF430Q9H8G1 570 aaPredicted RBP16.49■□□□□ 0.23
SNX3-201ENST00000230085 DYSFO75923 2080 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 SRRM4A7MD48 611 aaKnown RBP16.49■□□□□ 0.23
SNX3-201ENST00000230085 NTF3P20783 257 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 COL8A2P25067 703 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 PCP4P48539 62 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 RBX1P62877 108 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 ERHP84090 104 aaKnown RBP16.49■□□□□ 0.23
SNX3-201ENST00000230085 LRRC10Q5BKY1 277 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 PVRIGQ6DKI7 326 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 FXYD5Q96DB9 178 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 TMEM70Q9BUB7 260 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 PAXXQ9BUH6 204 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 MLST8Q9BVC4 326 aa16.49■□□□□ 0.23
SNX3-201ENST00000230085 VPS13CQ709C8 3753 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 TCRBV4S1A1TA0A5B7 111 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 B9A039 149 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 SAA1P0DJI8 122 aaPredicted RBP16.48■□□□□ 0.23
SNX3-201ENST00000230085 MYOD1P15172 320 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 IGLL1P15814 213 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 FAM120AOSQ5T036 256 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 C11orf71Q6IPW1 123 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 CCL19Q99731 98 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 HINT2Q9BX68 163 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 ZNF355PQ9NSJ1 428 aa16.48■□□□□ 0.23
SNX3-201ENST00000230085 IGHV3OR15-7A0A075B7D8 119 aa16.47■□□□□ 0.23
SNX3-201ENST00000230085 CDKN1BP46527 198 aa16.47■□□□□ 0.23
SNX3-201ENST00000230085 C10orf113Q5VZT2 155 aa16.47■□□□□ 0.23
SNX3-201ENST00000230085 ZNF788Q6ZQV5 615 aa16.47■□□□□ 0.23
SNX3-201ENST00000230085 MOGAT3Q86VF5 341 aa16.47■□□□□ 0.23
SNX3-201ENST00000230085 TMEM167AQ8TBQ9 72 aa16.47■□□□□ 0.23
SNX3-201ENST00000230085 IGFBPL1Q8WX77 278 aa16.47■□□□□ 0.23
SNX3-201ENST00000230085 HLA-DRB1P01911 266 aa16.46■□□□□ 0.23
SNX3-201ENST00000230085 OR5AL1P0C617 328 aa16.46■□□□□ 0.23
SNX3-201ENST00000230085 TNFSF4P23510 183 aa16.46■□□□□ 0.23
SNX3-201ENST00000230085 GATA2P23769 480 aaPredicted RBP16.46■□□□□ 0.23
SNX3-201ENST00000230085 RHOGP84095 191 aa16.46■□□□□ 0.23
SNX3-201ENST00000230085 PAX2Q02962 417 aa16.46■□□□□ 0.23
SNX3-201ENST00000230085 ZCCHC24Q8N2G6 241 aaKnown RBP16.46■□□□□ 0.23
SNX3-201ENST00000230085 C8orf31Q8N9H6 132 aa16.46■□□□□ 0.23
SNX3-201ENST00000230085 OR5AN1Q8NGI8 311 aa16.46■□□□□ 0.23
SNX3-201ENST00000230085 GAFA1Q96PS6 74 aa16.46■□□□□ 0.23
SNX3-201ENST00000230085 RNF7Q9UBF6 113 aa16.46■□□□□ 0.23
SNX3-201ENST00000230085 TRAV30A0A087WSZ9 112 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 HIGD1CA8MV81 97 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 COX7A2P2O60397 106 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 CA1P00915 261 aaPredicted RBP16.46■□□□□ 0.22
SNX3-201ENST00000230085 IGKV1-16P04430 117 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 MORN5Q5VZ52 161 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 LCN12Q6JVE5 192 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 PATE2Q6UY27 113 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 VSTM2AQ8TAG5 236 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 LEAP2Q969E1 77 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 URB1-AS1Q96HZ7 61 aa16.46■□□□□ 0.22
SNX3-201ENST00000230085 RPL8P62917 257 aaKnown RBP16.45■□□□□ 0.22
SNX3-201ENST00000230085 HBBP68871 147 aa16.45■□□□□ 0.22
SNX3-201ENST00000230085 TEX36Q5VZQ5 186 aa16.45■□□□□ 0.22
SNX3-201ENST00000230085 GPR82Q96P67 336 aa16.45■□□□□ 0.22
SNX3-201ENST00000230085 LINC00312Q9Y6C7 94 aa16.45■□□□□ 0.22
SNX3-201ENST00000230085 IGKV1D-37A0A075B6S9 117 aa16.44■□□□□ 0.22
SNX3-201ENST00000230085 IGHV3-7P01780 117 aa16.44■□□□□ 0.22
SNX3-201ENST00000230085 APOA2P02652 100 aa16.44■□□□□ 0.22
SNX3-201ENST00000230085 SUB1P53999 127 aaKnown RBP eCLIP16.44■□□□□ 0.225e-28■■□□□ 12.7
SNX3-201ENST00000230085 ARL6IP6Q8N6S5 226 aa16.44■□□□□ 0.22
SNX3-201ENST00000230085 C22orf15Q8WYQ4 148 aa16.44■□□□□ 0.22
SNX3-201ENST00000230085 SSBP3Q9BWW4 388 aaPredicted RBP16.44■□□□□ 0.22
SNX3-201ENST00000230085 EPDR1Q9UM22 224 aa16.44■□□□□ 0.22
SNX3-201ENST00000230085 SETXQ7Z333 2677 aaKnown RBP16.44■□□□□ 0.22
SNX3-201ENST00000230085 PDZD2O15018 2839 aa16.44■□□□□ 0.22
SNX3-201ENST00000230085 C19orf71A6NCJ1 209 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 A8MWL6 223 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 OVOL3O00110 214 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 MEF2CQ06413 473 aaPredicted RBP16.43■□□□□ 0.22
SNX3-201ENST00000230085 ITLN1Q8WWA0 313 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 NDFIP1Q9BT67 221 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 PPIAL4AQ9Y536 164 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 TRAV5A0A0B4J249 113 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 VWC2LB2RUY7 222 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 CRYGCP07315 174 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 HINT1P49773 126 aaPredicted RBP16.43■□□□□ 0.22
SNX3-201ENST00000230085 SAPCD1Q5SSQ6 148 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 FMC1Q96HJ9 113 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 RPP21Q9H633 154 aaKnown RBP16.43■□□□□ 0.22
SNX3-201ENST00000230085 DYNLRB1Q9NP97 96 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 TNCP24821 2201 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 NOTCH2Q04721 2471 aa16.43■□□□□ 0.22
SNX3-201ENST00000230085 ANKRD17O75179 2603 aaKnown RBP16.43■□□□□ 0.22
SNX3-201ENST00000230085 LOC105371242A0A075B767 164 aa16.42■□□□□ 0.22
SNX3-201ENST00000230085 TRBV6-1A0A0K0K1D8 114 aa16.42■□□□□ 0.22
SNX3-201ENST00000230085 hADV38S2A0JD32 116 aa16.42■□□□□ 0.22
SNX3-201ENST00000230085 NPIPB6E9PJ23 425 aa16.42■□□□□ 0.22
SNX3-201ENST00000230085 FBLN7Q53RD9 439 aa16.42■□□□□ 0.22
SNX3-201ENST00000230085 SPRNQ5BIV9 151 aa16.42■□□□□ 0.22
SNX3-201ENST00000230085 UNQ5815/PRO19632Q6UWF5 114 aa16.42■□□□□ 0.22
SNX3-201ENST00000230085 LINC00479Q96M42 142 aa16.42■□□□□ 0.22
SNX3-201ENST00000230085 C22orf46C9J442 243 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 LTAP01374 205 aa16.41■□□□□ 0.22
SNX3-201ENST00000230085 MLANAQ16655 118 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms