RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 IGFL4Q6B9Z1 124 aa14.62□□□□□ -0.07
EXTL3-201ENST00000220562 HEATR5BQ9P2D3 2071 aa14.62□□□□□ -0.07
EXTL3-201ENST00000220562 COLCA2A8K830 154 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 AMBPP02760 352 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 RPL35AP18077 110 aaKnown RBP14.61□□□□□ -0.07
EXTL3-201ENST00000220562 CKS1BP61024 79 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 Q8TAT8 98 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 ACTL10Q5JWF8 245 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 TMEM86BQ8N661 226 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 ZNF479Q96JC4 524 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 IGHV3-53P01767 116 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 LINC00205P59089 165 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 PSG3Q16557 428 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 LINC01551Q86U37 167 aa14.61□□□□□ -0.07
EXTL3-201ENST00000220562 H3BUX3 64 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 SMPXQ9UHP9 88 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 NTF4P34130 210 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 ZNF876PQ49A33 203 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 GLRX5Q86SX6 157 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 TRBV24-1A0A075B6N3 115 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 TRAV1-1A0A0B4J248 108 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 ZNF138P52744 262 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 MS4A6AQ9H2W1 248 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 ERG28Q9UKR5 140 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 NUP35Q8NFH5 326 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 SRRM4A7MD48 611 aaKnown RBP14.6□□□□□ -0.07
EXTL3-201ENST00000220562 MORN3Q6PF18 240 aaPredicted RBP14.6□□□□□ -0.07
EXTL3-201ENST00000220562 TMEM14EPQ6UXP3 125 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 MDS2Q8NDY4 140 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 TRGV1A0A0A0MS02 117 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 FCN3O75636 299 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 SRSF6Q13247 344 aaKnown RBP14.6□□□□□ -0.07
EXTL3-201ENST00000220562 SPSB3Q6PJ21 355 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 RNF5Q99942 180 aa14.6□□□□□ -0.07
EXTL3-201ENST00000220562 TMEM249Q2WGJ8 235 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 RPP25LQ8N5L8 163 aaKnown RBP14.59□□□□□ -0.07
EXTL3-201ENST00000220562 GGTLC3B5MD39 225 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 LSM4Q9Y4Z0 139 aaKnown RBP14.59□□□□□ -0.07
EXTL3-201ENST00000220562 SCN5AQ14524 2016 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 A8MWV9 139 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 M0R1W7 72 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 MDC1Q14676 2089 aaKnown RBP14.59□□□□□ -0.07
EXTL3-201ENST00000220562 C5orf64Q2M2E5 130 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 LCN12Q6JVE5 192 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 LYPD2Q6UXB3 125 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 C17orf82Q86X59 251 aaPredicted RBP14.59□□□□□ -0.07
EXTL3-201ENST00000220562 DPH3P1Q9H4G8 78 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 IGKV1D-17A0A075B6S4 117 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 UBE2DNLQ8IWF7 75 aa14.59□□□□□ -0.07
EXTL3-201ENST00000220562 TNFSF13O75888 250 aa14.58□□□□□ -0.07
EXTL3-201ENST00000220562 CMC4P56277 68 aaPredicted RBP14.58□□□□□ -0.07
EXTL3-201ENST00000220562 ATXN8Q156A1 80 aa14.58□□□□□ -0.07
EXTL3-201ENST00000220562 RASL11AQ6T310 242 aa14.58□□□□□ -0.07
EXTL3-201ENST00000220562 QRFPP83859 136 aa14.58□□□□□ -0.08
EXTL3-201ENST00000220562 SPAG8Q99932 426 aaPredicted RBP14.58□□□□□ -0.08
EXTL3-201ENST00000220562 COL8A2P25067 703 aa14.58□□□□□ -0.08
EXTL3-201ENST00000220562 GATD1Q8NB37 220 aa14.58□□□□□ -0.08
EXTL3-201ENST00000220562 GBF1Q92538 1859 aa14.58□□□□□ -0.08
EXTL3-201ENST00000220562 TMEM238C9JI98 176 aa14.58□□□□□ -0.08
EXTL3-201ENST00000220562 B3GALT5-AS1P59052 145 aa14.58□□□□□ -0.08
EXTL3-201ENST00000220562 CST9LQ9H4G1 147 aa14.58□□□□□ -0.08
EXTL3-201ENST00000220562 KNTC1P50748 2209 aa14.58□□□□□ -0.08
EXTL3-201ENST00000220562 TET1Q8NFU7 2136 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 OOSP1A8MZH6 123 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 SEC11AP67812 179 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 GAGE13Q4V321 117 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 hDV102S1A0JD36 115 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 TOMM40O96008 361 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 ZNF329Q86UD4 541 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 C20orf204Q6ZNR8 217 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 ANAPC13Q9BS18 74 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 TRBV6-6A0A0A6YYG2 114 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 TEX43Q6ZNM6 134 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 SIGLEC9Q9Y336 463 aa14.57□□□□□ -0.08
EXTL3-201ENST00000220562 B4DSR2 109 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 ASCL4Q6XD76 172 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 C9orf139Q6ZV77 190 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 NAA38Q9BRA0 125 aaKnown RBP14.56□□□□□ -0.08
EXTL3-201ENST00000220562 LINC01549A6NIU2 74 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 BMPERQ8N8U9 685 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 TMEM190Q8WZ59 177 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 CSTL1Q9H114 145 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 FAM223BA6NKX1 122 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 FAM223AQ8IWN6 122 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 PIP4P2Q8N4L2 257 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 LINC00477Q96M19 166 aa14.56□□□□□ -0.08
EXTL3-201ENST00000220562 GUSBP1Q15486 140 aa14.55□□□□□ -0.08
EXTL3-201ENST00000220562 TMEM155Q4W5P6 130 aa14.55□□□□□ -0.08
EXTL3-201ENST00000220562 ERCC8Q13216 396 aa14.55□□□□□ -0.08
EXTL3-201ENST00000220562 REG4Q9BYZ8 158 aa14.55□□□□□ -0.08
EXTL3-201ENST00000220562 A0A087WX48 190 aa14.55□□□□□ -0.08
EXTL3-201ENST00000220562 RPL36AP83881 106 aaKnown RBP14.55□□□□□ -0.08
EXTL3-201ENST00000220562 C14orf178Q8N769 122 aaPredicted RBP14.55□□□□□ -0.08
EXTL3-201ENST00000220562 RPL36ALQ969Q0 106 aaKnown RBP14.55□□□□□ -0.08
EXTL3-201ENST00000220562 C15orf62A8K5M9 175 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 SMKR1H3BMG3 65 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 SRSF4Q08170 494 aaKnown RBP14.54□□□□□ -0.08
EXTL3-201ENST00000220562 SIGMAR1Q99720 223 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 SPOCK3Q9BQ16 436 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 LINC01559Q495D7 138 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms